Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq34 122 2e-22 seq32 122 2e-22 >seq34 Length=123199 Score = 122 bits (134), Expect = 2e-22 Identities = 158/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||||||| || || || || || || || || |||||||| || ||||| || || Sbjct 109810 CAGATATTTGTAAAGACACTGACTGGTAAGACAATTACTTTGGAGGTAGAAAGCTCGGAT 109751 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 | | ||| || |||||||| ||||||||| |||||||||||| || || || Sbjct 109750 AGCATTGAAAATGTCAAAGCAAA-GATTCAAGACAAAGAAGGAATTCCTCCTGAGCAGCA 109692 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 |||||||| || || ||||| ||| ||||||| ||||| || || | ||||| || | Sbjct 109691 GAGACTTATTTTTGCAGGAAAACAGCTGGAAGACGGAAGAACATTATCAGATTATAATAT 109632 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 |||||| || || || ||| | ||||||||||| Sbjct 109631 CCAGAAGGAAAGCACACTGCACTTGGTTTTGAGACT 109596 >seq32 Length=103007 Score = 122 bits (134), Expect = 2e-22 Identities = 158/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||||||| || || || || || || || || |||||||| || ||||| || || Sbjct 13391 CAGATATTTGTAAAGACACTGACTGGTAAGACAATTACTTTGGAGGTAGAAAGCTCGGAT 13450 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 | | ||| || |||||||| ||||||||| |||||||||||| || || || Sbjct 13451 AGCATTGAAAATGTCAAAGCAAA-GATTCAAGACAAAGAAGGAATTCCTCCTGAGCAGCA 13509 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 |||||||| || || ||||| ||| ||||||| ||||| || || | ||||| || | Sbjct 13510 GAGACTTATTTTTGCAGGAAAACAGCTGGAAGACGGAAGAACATTATCAGATTATAATAT 13569 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 |||||| || || || ||| | ||||||||||| Sbjct 13570 CCAGAAGGAAAGCACACTGCACTTGGTTTTGAGACT 13605 Score = 122 bits (134), Expect = 2e-22 Identities = 158/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||||||| || || || || || || || || |||||||| || ||||| || || Sbjct 23349 CAGATATTTGTAAAGACACTGACTGGTAAGACAATTACTTTGGAGGTAGAAAGCTCGGAT 23290 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 | | ||| || |||||||| ||||||||| |||||||||||| || || || Sbjct 23289 AGCATTGAAAATGTCAAAGCAAA-GATTCAAGACAAAGAAGGAATTCCTCCTGAGCAGCA 23231 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 |||||||| || || ||||| ||| ||||||| ||||| || || | ||||| || | Sbjct 23230 GAGACTTATTTTTGCAGGAAAACAGCTGGAAGACGGAAGAACATTATCAGATTATAATAT 23171 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 |||||| || || || ||| | ||||||||||| Sbjct 23170 CCAGAAGGAAAGCACACTGCACTTGGTTTTGAGACT 23135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181819861191102