Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq34 82.4 7e-11 seq32 82.4 7e-11 >seq34 Length=123199 Score = 82.4 bits (90), Expect = 7e-11 Identities = 159/233 (68%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | |||||||| ||| | || || || | || || | || || ||| | Sbjct 109813 ATGCAGATATTTGTAAAGACACTGACTGGTAAGACAATTACTTTGGAGGTAGAAAGCTCG 109754 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 |||| || || | || ||| ||| ||| || ||||| || || || || || ||| Sbjct 109753 GATAGCATTGAAAATGTCAAAGCAAAGATTCAAGACAAAGAAGGAATTCCTCCTGAGCAG 109694 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352 || ||||| |||| | || ||||| || ||||| | |||| | |||| |||| | Sbjct 109693 CAGAGACTTATTTTTGCAGGAAAACAGCTGGAAGACGGAAGAACATTATCAG--ATTATA 109636 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAAAA 25405 |||| || || ||| ||| | || || || || ||| |||||||||||||| Sbjct 109635 ATATCCAGAAGGAAAGCACACTGCACTTGGTTTTGAGACTGAGAGGAGGAAAA 109583 >seq32 Length=103007 Score = 82.4 bits (90), Expect = 7e-11 Identities = 159/233 (68%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | |||||||| ||| | || || || | || || | || || ||| | Sbjct 13388 ATGCAGATATTTGTAAAGACACTGACTGGTAAGACAATTACTTTGGAGGTAGAAAGCTCG 13447 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 |||| || || | || ||| ||| ||| || ||||| || || || || || ||| Sbjct 13448 GATAGCATTGAAAATGTCAAAGCAAAGATTCAAGACAAAGAAGGAATTCCTCCTGAGCAG 13507 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352 || ||||| |||| | || ||||| || ||||| | |||| | |||| |||| | Sbjct 13508 CAGAGACTTATTTTTGCAGGAAAACAGCTGGAAGACGGAAGAACATTATCAG--ATTATA 13565 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAAAA 25405 |||| || || ||| ||| | || || || || ||| |||||||||||||| Sbjct 13566 ATATCCAGAAGGAAAGCACACTGCACTTGGTTTTGAGACTGAGAGGAGGAAAA 13618 Score = 82.4 bits (90), Expect = 7e-11 Identities = 159/233 (68%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | |||||||| ||| | || || || | || || | || || ||| | Sbjct 23352 ATGCAGATATTTGTAAAGACACTGACTGGTAAGACAATTACTTTGGAGGTAGAAAGCTCG 23293 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 |||| || || | || ||| ||| ||| || ||||| || || || || || ||| Sbjct 23292 GATAGCATTGAAAATGTCAAAGCAAAGATTCAAGACAAAGAAGGAATTCCTCCTGAGCAG 23233 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352 || ||||| |||| | || ||||| || ||||| | |||| | |||| |||| | Sbjct 23232 CAGAGACTTATTTTTGCAGGAAAACAGCTGGAAGACGGAAGAACATTATCAG--ATTATA 23175 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAAAA 25405 |||| || || ||| ||| | || || || || ||| |||||||||||||| Sbjct 23174 ATATCCAGAAGGAAAGCACACTGCACTTGGTTTTGAGACTGAGAGGAGGAAAA 23122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445094055051840