Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq34 86.0 6e-12 seq32 86.0 6e-12 >seq34 Length=123199 Score = 86.0 bits (94), Expect = 6e-12 Identities = 164/239 (69%), Gaps = 7/239 (3%) Strand=Plus/Plus Query 35501 TCTTTATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTG 35560 ||||| ||||| || | | ||||| ||||| || | || || ||||| || || || Sbjct 109579 TCTTT-TTTCCTCCTCTCAGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTA 109637 Query 35561 TAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGG 35620 ||||| | || |||| |||| |||||||| || || ||||| || | | |||||| Sbjct 109638 TAATCTGATAATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGC 109697 Query 35621 TCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTC 35680 || | ||||| | || ||||| |||||| || | | || | | | || | Sbjct 109698 TCAGGAGGAATTCCTTCTTTGTCTTGAATCTTTGCTTTGACATTTTCAATGCTATC---C 109754 Query 35681 GA---TTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || ||| ||||||| || || || ||||| |||| || || |||||||||||||| Sbjct 109755 GAGCTTTCTACCTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCAT 109813 >seq32 Length=103007 Score = 86.0 bits (94), Expect = 6e-12 Identities = 164/239 (69%), Gaps = 7/239 (3%) Strand=Plus/Minus Query 35501 TCTTTATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTG 35560 ||||| ||||| || | | ||||| ||||| || | || || ||||| || || || Sbjct 13622 TCTTT-TTTCCTCCTCTCAGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTA 13564 Query 35561 TAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGG 35620 ||||| | || |||| |||| |||||||| || || ||||| || | | |||||| Sbjct 13563 TAATCTGATAATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGC 13504 Query 35621 TCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTC 35680 || | ||||| | || ||||| |||||| || | | || | | | || | Sbjct 13503 TCAGGAGGAATTCCTTCTTTGTCTTGAATCTTTGCTTTGACATTTTCAATGCTATC---C 13447 Query 35681 GA---TTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || ||| ||||||| || || || ||||| |||| || || |||||||||||||| Sbjct 13446 GAGCTTTCTACCTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCAT 13388 Score = 86.0 bits (94), Expect = 6e-12 Identities = 164/239 (69%), Gaps = 7/239 (3%) Strand=Plus/Plus Query 35501 TCTTTATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTG 35560 ||||| ||||| || | | ||||| ||||| || | || || ||||| || || || Sbjct 23118 TCTTT-TTTCCTCCTCTCAGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTA 23176 Query 35561 TAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGG 35620 ||||| | || |||| |||| |||||||| || || ||||| || | | |||||| Sbjct 23177 TAATCTGATAATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGC 23236 Query 35621 TCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTC 35680 || | ||||| | || ||||| |||||| || | | || | | | || | Sbjct 23237 TCAGGAGGAATTCCTTCTTTGTCTTGAATCTTTGCTTTGACATTTTCAATGCTATC---C 23293 Query 35681 GA---TTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || ||| ||||||| || || || ||||| |||| || || |||||||||||||| Sbjct 23294 GAGCTTTCTACCTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCAT 23352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793250634960