Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq34 107 2e-18 seq32 107 2e-18 >seq34 Length=123199 Score = 107 bits (118), Expect = 2e-18 Identities = 166/232 (72%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC- 134542 ||||||||||| |||| ||| || | ||| || ||| |||||| || || || || || Sbjct 109584 TTTCCTCCTCTCAGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAATCT 109643 Query 134543 GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGG 134602 | || | | | ||| || |||||||| ||||||||||| | | |||||| || || Sbjct 109644 GATAATGTTCTTCC-GTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGG 109702 Query 134603 CGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATG-TGTCGGACGATT 134661 || || |||||||| |||||||| ||| ||||| | | ||||| | || || || Sbjct 109703 AGGAATTCCTTCTTTGTCTTGAATCTTTGCTTTGA-CATTTTCAATGCTATCCGAGCTTT 109761 Query 134662 CCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | || || | |||||| || ||||| || | || || || || || ||||| Sbjct 109762 CTACCTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCAT 109813 >seq32 Length=103007 Score = 107 bits (118), Expect = 2e-18 Identities = 166/232 (72%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC- 134542 ||||||||||| |||| ||| || | ||| || ||| |||||| || || || || || Sbjct 13617 TTTCCTCCTCTCAGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAATCT 13558 Query 134543 GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGG 134602 | || | | | ||| || |||||||| ||||||||||| | | |||||| || || Sbjct 13557 GATAATGTTCTTCC-GTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGG 13499 Query 134603 CGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATG-TGTCGGACGATT 134661 || || |||||||| |||||||| ||| ||||| | | ||||| | || || || Sbjct 13498 AGGAATTCCTTCTTTGTCTTGAATCTTTGCTTTGA-CATTTTCAATGCTATCCGAGCTTT 13440 Query 134662 CCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | || || | |||||| || ||||| || | || || || || || ||||| Sbjct 13439 CTACCTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCAT 13388 Score = 107 bits (118), Expect = 2e-18 Identities = 166/232 (72%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC- 134542 ||||||||||| |||| ||| || | ||| || ||| |||||| || || || || || Sbjct 23123 TTTCCTCCTCTCAGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAATCT 23182 Query 134543 GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGG 134602 | || | | | ||| || |||||||| ||||||||||| | | |||||| || || Sbjct 23183 GATAATGTTCTTCC-GTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGG 23241 Query 134603 CGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATG-TGTCGGACGATT 134661 || || |||||||| |||||||| ||| ||||| | | ||||| | || || || Sbjct 23242 AGGAATTCCTTCTTTGTCTTGAATCTTTGCTTTGA-CATTTTCAATGCTATCCGAGCTTT 23300 Query 134662 CCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | || || | |||||| || ||||| || | || || || || || ||||| Sbjct 23301 CTACCTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCAT 23352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398008316240