Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017-
04-06] 62 sequences; 3,253,521 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq39 214 1e-50
seq31 214 1e-50
seq36 196 4e-45
seq29 104 2e-17
>seq39
Length=84168
Score = 214 bits (236), Expect = 1e-50
Identities = 405/591 (69%), Gaps = 9/591 (2%)
Strand=Plus/Plus
Query 19226 ATGTGAAAGACATGCAAATTGGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAG 19285
|| ||| | || || ||||||| || || | | || ||| |||| ||| | ||||
Sbjct 34277 ATTTGAGAAACTTG-AAATTGGTGGTTTAAAAAGGGAATTTGAACAAATGTTTAGAAGAG 34335
Query 19286 CATTTGTGTCGCGTGTTTTTTCTGCAGATGTCATTAAACAATTGGGATGTAAACATGTTC 19345
||||||| | | ||||| | | || |||||| || ||||| ||||||
Sbjct 34336 CATTTGTTCAGAGACTTTTTGATCCTGAAACTATTAAAAAAATGGGAATACCACATGTAA 34395
Query 19346 GTGGACTTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTA 19405
||| || |||||||||| ||||| || ||||||||||||||||| ||| | ||
Sbjct 34396 AAGGAATTATGCTTTATGGACCACCTGGAACAGGAAAAACATTAATTGCAAGAAAGCTAG 34455
Query 19406 GTAAA---TTACTTACAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATA 19462
| | | ||| |||| | |||| ||| | || ||||| |||||||| ||||| |
Sbjct 34456 GAACACTTTTAGGGGCAAACCCACCT---AAAGTGGTTAATGGACCTGAAATTTTAAACA 34512
Query 19463 AATATGTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAAC 19522
| || || || ||| || |||||| || || ||||||||| || || |||| ||||
Sbjct 34513 AGTACGTGGGACAAAGCGAGGAAAATATAAGAAATTTGTTTGCAGAAGCAGAAGCAGAAT 34572
Query 19523 AAAAACGTTTAGGGCG-CAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCA 19581
| ||| | | |||| | | ||| | || || || ||| | |||||| | ||||||
Sbjct 34573 ATAAA-GCAAAAGGCGACCATTCTTCACTTCATATAATTATATTTGATGAAATAGACGCA 34631
Query 19582 ATCTGTAAGCAAAGAGGTTCTGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTC 19641
|| |||||| ||||||| || || | || || ||| | || || ||||||||
Sbjct 34632 ATTTGTAAGAAAAGAGGAAGTGATGCATCAGGCGTGGGTGATAAAGTGGTAAATCAACTT 34691
Query 19642 CTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAAT 19701
|| |||||| | || || |||||| ||| ||||| || ||||||||||| ||||| ||
Sbjct 34692 CTTTCAAAAATCGATGGAGTTAACGCACTCAATAACATCTTAGTTATTGGAATGACAAAC 34751
Query 19702 AGACTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAA 19761
||| |||| || ||||| || | ||| |||| || | || ||||| | | |||
Sbjct 34752 AGATTGGATTTGATAGATGATGCACTTTTAAGACCAGGAAGATTTGAAATTCATTTGGAA 34811
Query 19762 ATTAACTTACCCGATGAATGTGGACGTGTGGAAATTTTAAACATACATACA 19812
||| || || |||||| || ||| | |||||||| | || || |||
Sbjct 34812 ATTTCTTTGCCTGATGAAAATGCTCGTTTTGAAATTTTTCAAATTCACACA 34862
>seq31
Length=131337
Score = 214 bits (236), Expect = 1e-50
Identities = 405/591 (69%), Gaps = 9/591 (2%)
Strand=Plus/Minus
Query 19226 ATGTGAAAGACATGCAAATTGGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAG 19285
|| ||| | || || ||||||| || || | | || ||| |||| ||| | ||||
Sbjct 110295 ATTTGAGAAACTTG-AAATTGGTGGTTTAAAAAGGGAATTTGAACAAATGTTTAGAAGAG 110237
Query 19286 CATTTGTGTCGCGTGTTTTTTCTGCAGATGTCATTAAACAATTGGGATGTAAACATGTTC 19345
||||||| | | ||||| | | || |||||| || ||||| ||||||
Sbjct 110236 CATTTGTTCAGAGACTTTTTGATCCTGAAACTATTAAAAAAATGGGAATACCACATGTAA 110177
Query 19346 GTGGACTTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTA 19405
||| || |||||||||| ||||| || ||||||||||||||||| ||| | ||
Sbjct 110176 AAGGAATTATGCTTTATGGACCACCTGGAACAGGAAAAACATTAATTGCAAGAAAGCTAG 110117
Query 19406 GTAAA---TTACTTACAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATA 19462
| | | ||| |||| | |||| ||| | || ||||| |||||||| ||||| |
Sbjct 110116 GAACACTTTTAGGGGCAAACCCACCT---AAAGTGGTTAATGGACCTGAAATTTTAAACA 110060
Query 19463 AATATGTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAAC 19522
| || || || ||| || |||||| || || ||||||||| || || |||| ||||
Sbjct 110059 AGTACGTGGGACAAAGCGAGGAAAATATAAGAAATTTGTTTGCAGAAGCAGAAGCAGAAT 110000
Query 19523 AAAAACGTTTAGGGCG-CAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCA 19581
| ||| | | |||| | | ||| | || || || ||| | |||||| | ||||||
Sbjct 109999 ATAAA-GCAAAAGGCGACCATTCTTCACTTCATATAATTATATTTGATGAAATAGACGCA 109941
Query 19582 ATCTGTAAGCAAAGAGGTTCTGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTC 19641
|| |||||| ||||||| || || | || || ||| | || || ||||||||
Sbjct 109940 ATTTGTAAGAAAAGAGGAAGTGATGCATCAGGCGTGGGTGATAAAGTGGTAAATCAACTT 109881
Query 19642 CTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAAT 19701
|| |||||| | || || |||||| ||| ||||| || ||||||||||| ||||| ||
Sbjct 109880 CTTTCAAAAATCGATGGAGTTAACGCACTCAATAACATCTTAGTTATTGGAATGACAAAC 109821
Query 19702 AGACTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAA 19761
||| |||| || ||||| || | ||| |||| || | || ||||| | | |||
Sbjct 109820 AGATTGGATTTGATAGATGATGCACTTTTAAGACCAGGAAGATTTGAAATTCATTTGGAA 109761
Query 19762 ATTAACTTACCCGATGAATGTGGACGTGTGGAAATTTTAAACATACATACA 19812
||| || || |||||| || ||| | |||||||| | || || |||
Sbjct 109760 ATTTCTTTGCCTGATGAAAATGCTCGTTTTGAAATTTTTCAAATTCACACA 109710
>seq36
Length=80385
Score = 196 bits (216), Expect = 4e-45
Identities = 584/877 (67%), Gaps = 47/877 (5%)
Strand=Plus/Minus
Query 43697 AGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCAC-A 43755
|||| ||| | |||||||| |||||||| || |||||| | | || |||||| ||| |
Sbjct 38707 AGGTATGTTTTATTTCCAATACAATATCAAGAAATATGGGATTTTTATAAAAAA-CACGA 38649
Query 43756 GGCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGC 43815
| | |||||||| | ||||||||| || || ||| ||| || |||| | |
Sbjct 38648 ATCTACTTTTTGGACTGTAGAAGAAGTAGACTTAACTTTTGACATAATGCATTTTAATCA 38589
Query 43816 ATTAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGA 43875
| | || | | || || ||||||| ||| | || ||||||||||| ||
Sbjct 38588 ACTCAACAAAAACGAGCAATTTTTTATAAAAAGAGTTCTTGCATTTTTTGCTGCATCAGA 38529
Query 43876 CGGGATAGTCAATGAAAATTTGGTTAGTCGG-TTTGCGCAAGAAGTT-CAATTACCAGAA 43933
|| || || ||||||||||| | || | ||| | | || ||| | ||| |||
Sbjct 38528 TGGAATTGTAAATGAAAATTTA-TCAGAAAGATTTTCAAATGATGTTACCATTTTG-GAA 38471
Query 43934 GCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTA--CA 43991
||| |||||||| || ||||||||||| |||||||| || ||||| |||||||| ||
Sbjct 38470 GCAAAGTGTTTTTACGGCTTTCAAATTGCAATAGAAAACATACATTCAGAAATGTATTCA 38411
Query 43992 GTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGA 44051
| ||||||| || | | |||| | ||| | || | |||||||| |
Sbjct 38410 AAAT--TGATAGAAACATTGGTACCAGATTATAAAGAGCAAAATTATCTTTTTAATGCAA 38353
Query 44052 TAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAA 44111
|||||| |||| || ||||| | |||||||| ||||| | || ||||| | ||
Sbjct 38352 TAGAAAACATACCAGCAATTAAGAAAAAAGCAGAATGGGCACAAAAGTGGAT---TGTAA 38296
Query 44112 ATGATTCTTTTGGAGA-ACGACTT--GTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTT 44168
||| ||| | || |||| | || || ||||| ||| ||||| |||| ||||
Sbjct 38295 GCGATACTTCTTTTGACACGAGATGCGTGGCATTTGCGTGTGTAGAAGGAATTT--TTTT 38238
Query 44169 CA--GGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGAC 44226
|| || || ||||| || || |||||| | || || |||| |||||||| || | ||
Sbjct 38237 CAGTGGTTCTTTTGCTGCAATTTTTTGGCTCAAAAAGAGAGGATTGATGCCAGGACTAAC 38178
Query 44227 GTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTG-CTTGT 44285
||||||||||| | || | || || || | ||| |||||||| || ||| |
Sbjct 38177 ATTTTCAAATGAACTTATTTCCAGGGACGAGGGTCTTCATACAGATTTTGCATGTCTTTT 38118
Query 44286 -TACTTGGATATCTAGGAGACGATAAGCCTTCATGTAAGACAATTACAGATATTGTTGTA 44344
|| | | || ||| | ||||| || || | |||| || || ||| |
Sbjct 38117 ACACAAGTACAT-TAGAA----ATAAG------TGCAAAAGCATTAAAGCCATAGTTATG 38069
Query 44345 GAGGCAGTAAAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGA 44404
|| ||||| | |||||| |||| ||| ||||| |||||||| || | ||| || |||
Sbjct 38068 GAAGCAGTGGAAATAGAAAAAGAGTTTTTGACAGACGCATTACCAGTTAGTTTGATTGGA 38009
Query 44405 ATGAAT--GAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGG 44462
|||||| ||| || ||| || || || |||| | |||||| | ||| ||
Sbjct 38008 ATGAATTGTAACCTT--ATGGGACAGTACATAGAATTTGTGGCAGATAG---ACTGTT-- 37956
Query 44463 AACTGGGTTGCGA---TAAACACTATATTGTAC--AAAACCCGTTTGATTTTATGGAAAA 44517
| || || || ||| | |||| ||| |||| || |||||||||||||||||
Sbjct 37955 ATATGCATTAGGAGAGCAAAAAGTATACAATACGAAAAATCCATTTGATTTTATGGAAAA 37896
Query 44518 TATTTCGTTGGAAGGCAAAACAAACTTTTTTGaaaaa 44554
| ||||| || |||||||| || ||||| |||
Sbjct 37895 CTTGAGTTTGGAGGGAAAAACAAATTTCTTTGATAAA 37859
>seq29
Length=110338
Score = 104 bits (114), Expect = 2e-17
Identities = 301/452 (67%), Gaps = 16/452 (4%)
Strand=Plus/Plus
Query 40857 AGGGATGAAGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAA 40916
||||| | | ||| || || ||||||||||| ||||||| | |||||| ||| ||| |
Sbjct 17368 AGGGAAGCAAATGACCTGGGACCTGTTTATGGCTTTCAGTGGAGACATTATGGTGCACCA 17427
Query 40917 TATGACACTATGTACTCTGATTATACCAATAAA--GGAATGGATCAATTACAGTGCGTTA 40974
||||| || | | |||| | || || ||||| ||||| | | ||||
Sbjct 17428 TATGAAACGTGCAAGACAAATTA--CGAAGGAAAGGGAATTGATCAGCTTAGGGATGTTA 17485
Query 40975 TAGATACGATTAAATCCGATCCCGATAGCCGACGTATAATATTGTGCGCGTGGAACCCA- 41033
| || ||||| | |||| ||| || | | || |||| |||||||| ||
Sbjct 17486 TTGAGCAAATTAAGACAAATCCAACCAGCAGAAGACTGATTGTGTGTGCGTGGAATCCTT 17545
Query 41034 -ACGGACGTACATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTG 41092
|| | | || | |||||| | ||||| |||||| |||| ||| ||| | || |
Sbjct 17546 TACAG-CTTA-AGGAAATGGCACTTCCACCGTGTCATACTTTATTTCACTTTAAGGTGT- 17602
Query 41093 CAATGGTGAACTGTCATGT--CAAT-TGTATCAAAGATCAGGTGACATGGGACTAGGGGT 41149
||||| | || | | || | |||| |||||||||||||| | || | || ||
Sbjct 17603 --ATGGTAACAAGTTAAGCTGCATTCTGTACCAAAGATCAGGTGATGTTGGTTTGGGTGT 17660
Query 41150 CCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTACCAATTT 41209
|| |||||||| || ||||||||| |||| ||| || | ||| | | || ||| |
Sbjct 17661 TCCTTTTAACATTGCAAGTTATGCTTTGCTTACGATAATTGTGGCAAAATTAACAAATCT 17720
Query 41210 AAAACCTGGTGAATTTGTTCACACGTTAGGAGATGGACATATTTACATTAATCACATAGA 41269
| ||||| |||||||| |||| ||||||| || |||||| ||||| | ||
Sbjct 17721 AGAACCTAGTGAATTTATTCATTTTATAGGAGACACGCACGTTTACAAGGATCACGTTGA 17780
Query 41270 GCCGTTAACAGAACAACT-GACACGAAAACCT 41300
|| || | ||| ||||| |||| || |||||
Sbjct 17781 ACCATTGAAAGAGCAACTGGACA-GAGAACCT 17811
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455699672310
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |