Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq39 214 1e-50 seq31 214 1e-50 seq36 196 4e-45 seq29 104 2e-17 >seq39 Length=84168 Score = 214 bits (236), Expect = 1e-50 Identities = 405/591 (69%), Gaps = 9/591 (2%) Strand=Plus/Plus Query 19226 ATGTGAAAGACATGCAAATTGGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAG 19285 || ||| | || || ||||||| || || | | || ||| |||| ||| | |||| Sbjct 34277 ATTTGAGAAACTTG-AAATTGGTGGTTTAAAAAGGGAATTTGAACAAATGTTTAGAAGAG 34335 Query 19286 CATTTGTGTCGCGTGTTTTTTCTGCAGATGTCATTAAACAATTGGGATGTAAACATGTTC 19345 ||||||| | | ||||| | | || |||||| || ||||| |||||| Sbjct 34336 CATTTGTTCAGAGACTTTTTGATCCTGAAACTATTAAAAAAATGGGAATACCACATGTAA 34395 Query 19346 GTGGACTTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTA 19405 ||| || |||||||||| ||||| || ||||||||||||||||| ||| | || Sbjct 34396 AAGGAATTATGCTTTATGGACCACCTGGAACAGGAAAAACATTAATTGCAAGAAAGCTAG 34455 Query 19406 GTAAA---TTACTTACAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATA 19462 | | | ||| |||| | |||| ||| | || ||||| |||||||| ||||| | Sbjct 34456 GAACACTTTTAGGGGCAAACCCACCT---AAAGTGGTTAATGGACCTGAAATTTTAAACA 34512 Query 19463 AATATGTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAAC 19522 | || || || ||| || |||||| || || ||||||||| || || |||| |||| Sbjct 34513 AGTACGTGGGACAAAGCGAGGAAAATATAAGAAATTTGTTTGCAGAAGCAGAAGCAGAAT 34572 Query 19523 AAAAACGTTTAGGGCG-CAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCA 19581 | ||| | | |||| | | ||| | || || || ||| | |||||| | |||||| Sbjct 34573 ATAAA-GCAAAAGGCGACCATTCTTCACTTCATATAATTATATTTGATGAAATAGACGCA 34631 Query 19582 ATCTGTAAGCAAAGAGGTTCTGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTC 19641 || |||||| ||||||| || || | || || ||| | || || |||||||| Sbjct 34632 ATTTGTAAGAAAAGAGGAAGTGATGCATCAGGCGTGGGTGATAAAGTGGTAAATCAACTT 34691 Query 19642 CTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAAT 19701 || |||||| | || || |||||| ||| ||||| || ||||||||||| ||||| || Sbjct 34692 CTTTCAAAAATCGATGGAGTTAACGCACTCAATAACATCTTAGTTATTGGAATGACAAAC 34751 Query 19702 AGACTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAA 19761 ||| |||| || ||||| || | ||| |||| || | || ||||| | | ||| Sbjct 34752 AGATTGGATTTGATAGATGATGCACTTTTAAGACCAGGAAGATTTGAAATTCATTTGGAA 34811 Query 19762 ATTAACTTACCCGATGAATGTGGACGTGTGGAAATTTTAAACATACATACA 19812 ||| || || |||||| || ||| | |||||||| | || || ||| Sbjct 34812 ATTTCTTTGCCTGATGAAAATGCTCGTTTTGAAATTTTTCAAATTCACACA 34862 >seq31 Length=131337 Score = 214 bits (236), Expect = 1e-50 Identities = 405/591 (69%), Gaps = 9/591 (2%) Strand=Plus/Minus Query 19226 ATGTGAAAGACATGCAAATTGGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAG 19285 || ||| | || || ||||||| || || | | || ||| |||| ||| | |||| Sbjct 110295 ATTTGAGAAACTTG-AAATTGGTGGTTTAAAAAGGGAATTTGAACAAATGTTTAGAAGAG 110237 Query 19286 CATTTGTGTCGCGTGTTTTTTCTGCAGATGTCATTAAACAATTGGGATGTAAACATGTTC 19345 ||||||| | | ||||| | | || |||||| || ||||| |||||| Sbjct 110236 CATTTGTTCAGAGACTTTTTGATCCTGAAACTATTAAAAAAATGGGAATACCACATGTAA 110177 Query 19346 GTGGACTTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTA 19405 ||| || |||||||||| ||||| || ||||||||||||||||| ||| | || Sbjct 110176 AAGGAATTATGCTTTATGGACCACCTGGAACAGGAAAAACATTAATTGCAAGAAAGCTAG 110117 Query 19406 GTAAA---TTACTTACAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATA 19462 | | | ||| |||| | |||| ||| | || ||||| |||||||| ||||| | Sbjct 110116 GAACACTTTTAGGGGCAAACCCACCT---AAAGTGGTTAATGGACCTGAAATTTTAAACA 110060 Query 19463 AATATGTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAAC 19522 | || || || ||| || |||||| || || ||||||||| || || |||| |||| Sbjct 110059 AGTACGTGGGACAAAGCGAGGAAAATATAAGAAATTTGTTTGCAGAAGCAGAAGCAGAAT 110000 Query 19523 AAAAACGTTTAGGGCG-CAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCA 19581 | ||| | | |||| | | ||| | || || || ||| | |||||| | |||||| Sbjct 109999 ATAAA-GCAAAAGGCGACCATTCTTCACTTCATATAATTATATTTGATGAAATAGACGCA 109941 Query 19582 ATCTGTAAGCAAAGAGGTTCTGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTC 19641 || |||||| ||||||| || || | || || ||| | || || |||||||| Sbjct 109940 ATTTGTAAGAAAAGAGGAAGTGATGCATCAGGCGTGGGTGATAAAGTGGTAAATCAACTT 109881 Query 19642 CTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAAT 19701 || |||||| | || || |||||| ||| ||||| || ||||||||||| ||||| || Sbjct 109880 CTTTCAAAAATCGATGGAGTTAACGCACTCAATAACATCTTAGTTATTGGAATGACAAAC 109821 Query 19702 AGACTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAA 19761 ||| |||| || ||||| || | ||| |||| || | || ||||| | | ||| Sbjct 109820 AGATTGGATTTGATAGATGATGCACTTTTAAGACCAGGAAGATTTGAAATTCATTTGGAA 109761 Query 19762 ATTAACTTACCCGATGAATGTGGACGTGTGGAAATTTTAAACATACATACA 19812 ||| || || |||||| || ||| | |||||||| | || || ||| Sbjct 109760 ATTTCTTTGCCTGATGAAAATGCTCGTTTTGAAATTTTTCAAATTCACACA 109710 >seq36 Length=80385 Score = 196 bits (216), Expect = 4e-45 Identities = 584/877 (67%), Gaps = 47/877 (5%) Strand=Plus/Minus Query 43697 AGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCAC-A 43755 |||| ||| | |||||||| |||||||| || |||||| | | || |||||| ||| | Sbjct 38707 AGGTATGTTTTATTTCCAATACAATATCAAGAAATATGGGATTTTTATAAAAAA-CACGA 38649 Query 43756 GGCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGC 43815 | | |||||||| | ||||||||| || || ||| ||| || |||| | | Sbjct 38648 ATCTACTTTTTGGACTGTAGAAGAAGTAGACTTAACTTTTGACATAATGCATTTTAATCA 38589 Query 43816 ATTAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGA 43875 | | || | | || || ||||||| ||| | || ||||||||||| || Sbjct 38588 ACTCAACAAAAACGAGCAATTTTTTATAAAAAGAGTTCTTGCATTTTTTGCTGCATCAGA 38529 Query 43876 CGGGATAGTCAATGAAAATTTGGTTAGTCGG-TTTGCGCAAGAAGTT-CAATTACCAGAA 43933 || || || ||||||||||| | || | ||| | | || ||| | ||| ||| Sbjct 38528 TGGAATTGTAAATGAAAATTTA-TCAGAAAGATTTTCAAATGATGTTACCATTTTG-GAA 38471 Query 43934 GCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTA--CA 43991 ||| |||||||| || ||||||||||| |||||||| || ||||| |||||||| || Sbjct 38470 GCAAAGTGTTTTTACGGCTTTCAAATTGCAATAGAAAACATACATTCAGAAATGTATTCA 38411 Query 43992 GTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGA 44051 | ||||||| || | | |||| | ||| | || | |||||||| | Sbjct 38410 AAAT--TGATAGAAACATTGGTACCAGATTATAAAGAGCAAAATTATCTTTTTAATGCAA 38353 Query 44052 TAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAA 44111 |||||| |||| || ||||| | |||||||| ||||| | || ||||| | || Sbjct 38352 TAGAAAACATACCAGCAATTAAGAAAAAAGCAGAATGGGCACAAAAGTGGAT---TGTAA 38296 Query 44112 ATGATTCTTTTGGAGA-ACGACTT--GTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTT 44168 ||| ||| | || |||| | || || ||||| ||| ||||| |||| |||| Sbjct 38295 GCGATACTTCTTTTGACACGAGATGCGTGGCATTTGCGTGTGTAGAAGGAATTT--TTTT 38238 Query 44169 CA--GGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGAC 44226 || || || ||||| || || |||||| | || || |||| |||||||| || | || Sbjct 38237 CAGTGGTTCTTTTGCTGCAATTTTTTGGCTCAAAAAGAGAGGATTGATGCCAGGACTAAC 38178 Query 44227 GTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTG-CTTGT 44285 ||||||||||| | || | || || || | ||| |||||||| || ||| | Sbjct 38177 ATTTTCAAATGAACTTATTTCCAGGGACGAGGGTCTTCATACAGATTTTGCATGTCTTTT 38118 Query 44286 -TACTTGGATATCTAGGAGACGATAAGCCTTCATGTAAGACAATTACAGATATTGTTGTA 44344 || | | || ||| | ||||| || || | |||| || || ||| | Sbjct 38117 ACACAAGTACAT-TAGAA----ATAAG------TGCAAAAGCATTAAAGCCATAGTTATG 38069 Query 44345 GAGGCAGTAAAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGA 44404 || ||||| | |||||| |||| ||| ||||| |||||||| || | ||| || ||| Sbjct 38068 GAAGCAGTGGAAATAGAAAAAGAGTTTTTGACAGACGCATTACCAGTTAGTTTGATTGGA 38009 Query 44405 ATGAAT--GAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGG 44462 |||||| ||| || ||| || || || |||| | |||||| | ||| || Sbjct 38008 ATGAATTGTAACCTT--ATGGGACAGTACATAGAATTTGTGGCAGATAG---ACTGTT-- 37956 Query 44463 AACTGGGTTGCGA---TAAACACTATATTGTAC--AAAACCCGTTTGATTTTATGGAAAA 44517 | || || || ||| | |||| ||| |||| || ||||||||||||||||| Sbjct 37955 ATATGCATTAGGAGAGCAAAAAGTATACAATACGAAAAATCCATTTGATTTTATGGAAAA 37896 Query 44518 TATTTCGTTGGAAGGCAAAACAAACTTTTTTGaaaaa 44554 | ||||| || |||||||| || ||||| ||| Sbjct 37895 CTTGAGTTTGGAGGGAAAAACAAATTTCTTTGATAAA 37859 >seq29 Length=110338 Score = 104 bits (114), Expect = 2e-17 Identities = 301/452 (67%), Gaps = 16/452 (4%) Strand=Plus/Plus Query 40857 AGGGATGAAGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAA 40916 ||||| | | ||| || || ||||||||||| ||||||| | |||||| ||| ||| | Sbjct 17368 AGGGAAGCAAATGACCTGGGACCTGTTTATGGCTTTCAGTGGAGACATTATGGTGCACCA 17427 Query 40917 TATGACACTATGTACTCTGATTATACCAATAAA--GGAATGGATCAATTACAGTGCGTTA 40974 ||||| || | | |||| | || || ||||| ||||| | | |||| Sbjct 17428 TATGAAACGTGCAAGACAAATTA--CGAAGGAAAGGGAATTGATCAGCTTAGGGATGTTA 17485 Query 40975 TAGATACGATTAAATCCGATCCCGATAGCCGACGTATAATATTGTGCGCGTGGAACCCA- 41033 | || ||||| | |||| ||| || | | || |||| |||||||| || Sbjct 17486 TTGAGCAAATTAAGACAAATCCAACCAGCAGAAGACTGATTGTGTGTGCGTGGAATCCTT 17545 Query 41034 -ACGGACGTACATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTG 41092 || | | || | |||||| | ||||| |||||| |||| ||| ||| | || | Sbjct 17546 TACAG-CTTA-AGGAAATGGCACTTCCACCGTGTCATACTTTATTTCACTTTAAGGTGT- 17602 Query 41093 CAATGGTGAACTGTCATGT--CAAT-TGTATCAAAGATCAGGTGACATGGGACTAGGGGT 41149 ||||| | || | | || | |||| |||||||||||||| | || | || || Sbjct 17603 --ATGGTAACAAGTTAAGCTGCATTCTGTACCAAAGATCAGGTGATGTTGGTTTGGGTGT 17660 Query 41150 CCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTACCAATTT 41209 || |||||||| || ||||||||| |||| ||| || | ||| | | || ||| | Sbjct 17661 TCCTTTTAACATTGCAAGTTATGCTTTGCTTACGATAATTGTGGCAAAATTAACAAATCT 17720 Query 41210 AAAACCTGGTGAATTTGTTCACACGTTAGGAGATGGACATATTTACATTAATCACATAGA 41269 | ||||| |||||||| |||| ||||||| || |||||| ||||| | || Sbjct 17721 AGAACCTAGTGAATTTATTCATTTTATAGGAGACACGCACGTTTACAAGGATCACGTTGA 17780 Query 41270 GCCGTTAACAGAACAACT-GACACGAAAACCT 41300 || || | ||| ||||| |||| || ||||| Sbjct 17781 ACCATTGAAAGAGCAACTGGACA-GAGAACCT 17811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455699672310