Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq36 260 4e-64 seq34 165 2e-35 seq32 165 2e-35 seq35 156 1e-32 seq23 89.7 2e-12 >seq36 Length=80385 Score = 260 bits (288), Expect = 4e-64 Identities = 568/857 (66%), Gaps = 17/857 (2%) Strand=Plus/Plus Query 223422 CTACTCTTCTTTCaaaaaaaTTTGTTTTTCCTTCTATACTTATCATTTCCATAAAATCAA 223481 || || || | ||||| |||||||||||||| || | ||| | ||||||||||||||| Sbjct 37852 CTTCTTTTTTATCAAAGAAATTTGTTTTTCCCTCCAAACTCAAGTTTTCCATAAAATCAA 37911 Query 223482 ACGGATTACTAGAATTATAAATTTTATTATTTCCTAATTGAACTGCTAATCTATCTGCTA 223541 | ||||| | | ||| || | ||| | | ||||||| | | | ||||||||| | Sbjct 37912 ATGGATTTTTCGTATTGTATACTTTTTGCTCTCCTAATGCATATAACAGTCTATCTGCCA 37971 Query 223542 CAAATTCTATATATTGTGACATTAATTTACTATTCATACCTATTAAATTACACGGCAATG 223601 |||||||||| || ||| ||| | |||| |||||| || || ||| || || |||| Sbjct 37972 CAAATTCTATGTACTGTCCCATAAGGTTACAATTCATTCCAATCAAACTAACTGGTAATG 38031 Query 223602 CTTCACAGATAAACTCTTTTTCTATTTCTACCGCATTTTTTATTATTNNNNNNNNNNNNN 223661 | || | |||||||||||||||||| || || | | | ||| Sbjct 38032 CGTCTGTCAAAAACTCTTTTTCTATTTCCACTGCTTCCATAACTAT-------GGCTTTA 38084 Query 223662 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATACA-GCAAATTCTGTATGTAAT 223720 || ||| ||||| |||||||| | Sbjct 38085 ATGCTTTTGCACTTATTTCTAATGTACTTGTGTAAAAGACATGCAAAATCTGTATGAAGA 38144 Query 223721 GCCTCATCTCTTGATATTAATTCATTTGAAAATGTTAATCCAGGCATTAAACCTCTCTTT 223780 |||| || || || || | ||||||||||||||||| ||| ||||| || ||||||||| Sbjct 38145 CCCTCGTCCCTGGAAATAAGTTCATTTGAAAATGTTAGTCCTGGCATCAATCCTCTCTTT 38204 Query 223781 TTCATCCAAAATATTGC-GCAAAA-AGCTCCTGaaaaaaaTATACCTTCTACACAAGCAA 223838 || | |||||| ||||| |||||| | | ||||||||| || ||||||||||| |||| Sbjct 38205 TTGAGCCAAAAAATTGCAGCAAAAGAACCACTGAAAAAA--ATTCCTTCTACACACGCAA 38262 Query 223839 ACGCTACTAATCGTGTTGCAAAATTTGAATCTTTGTCTCCTATCCATTTTAATGCCCAAT 223898 | || || ||| || ||||| ||| | | | | ||||| ||| |||||| | Sbjct 38263 ATGCCACGCATCTCGTGTCAAAA---GAAGTATCGCTTACAATCCACTTTTGTGCCCATT 38319 Query 223899 CTGCTTTTTTCTTAATACAAGAAAAATTTTCTAAAGCATTAAACAACTTCGATTTCTCAT 223958 |||||||||||||||| | | ||||||| |||||||| | | || ||| | Sbjct 38320 CTGCTTTTTTCTTAATTGCTGGTATGTTTTCTATTGCATTAAAAAGATAATTTTGCTCTT 38379 Query 223959 TATGATCACTTATATATGTTTCTATTAATTGACTATACATTATTGAATGTATATTTTCCA 224018 ||| ||| || |||||||||| |||| ||||||| ||||||||| ||||| | Sbjct 38380 TATAATCTGGTACCAATGTTTCTATCAATTTTGAATACATTTCTGAATGTATGTTTTCTA 38439 Query 224019 TTGCTATTTGAAATCCATAAAATGCTTTTGCCTCTGCTATTTGTACTTCTGTCATAAATC 224078 |||| |||||||| || ||||| ||||| || || || || | ||||| Sbjct 38440 TTGCAATTTGAAAGCCGTAAAAACACTTTGCTTCCAAAATGGTAACATCATTTGAAAATC 38499 Query 224079 TTAATCCTAAATTCTCTAATACTATACCATCACTTGCCGCAAAAAATGCCAATATCATAG 224138 || | |||||| || ||| || ||||| ||| ||||||||||| | | | Sbjct 38500 TTTCTGATAAATTTTCATTTACAATTCCATCTGATGCAGCAAAAAATGCAAGAACTCTTT 38559 Query 224139 AAATAAAATATCTTTCATCATTGGTTA-ATGATAACCAGTGCGATAAATCTTTTGATAAA 224197 |||||| || || | ||| | | |||| | | ||| || || | ||| Sbjct 38560 TTATAAAAAATTGCTCGTTTTTGTTGAGTTGATTA-AAATGCATTATGTCAAAAGTTAAG 38618 Query 224198 TCAACTTCTTGTGCTCTCCAAAAACAATCTTCTGCTTTTTTATACATTTCCCATATATCT 224257 || ||||||| | | |||||||| | ||| ||||||||| | |||||||| ||| Sbjct 38619 TCTACTTCTTCTACAGTCCAAAAAGTAGATTCGTGTTTTTTATAAAAATCCCATATTTCT 38678 Query 224258 TGGTCTTGTATCGGAAA 224274 || | |||||| ||||| Sbjct 38679 TGATATTGTATTGGAAA 38695 >seq34 Length=123199 Score = 165 bits (182), Expect = 2e-35 Identities = 151/191 (79%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 140547 TCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAG 140606 || || || ||||||||||| |||||||||| || ||||| || |||||||| ||||| Sbjct 109623 TCCTTCTGGATATTATAATCTGATAATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAAA 109682 Query 140607 ATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTA 140666 || || | ||||| |||||||||||||||||||| || ||||| || ||||| ||||| Sbjct 109683 ATAAGTCTCTGCTGCTCAGGAGGAATTCCTTCTTTGTCTTGAATCTTTGCTTTGACATTT 109742 Query 140667 TCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACA 140726 ||||| ||| || ||| || || | |||| |||||| || || ||||| |||||| Sbjct 109743 TCAATGCTATCCGAGCTTTCTACCTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTACA 109802 Query 140727 AAAATCTGCAT 140737 || |||||||| Sbjct 109803 AATATCTGCAT 109813 >seq32 Length=103007 Score = 165 bits (182), Expect = 2e-35 Identities = 151/191 (79%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 140547 TCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAG 140606 || || || ||||||||||| |||||||||| || ||||| || |||||||| ||||| Sbjct 13578 TCCTTCTGGATATTATAATCTGATAATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAAA 13519 Query 140607 ATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTA 140666 || || | ||||| |||||||||||||||||||| || ||||| || ||||| ||||| Sbjct 13518 ATAAGTCTCTGCTGCTCAGGAGGAATTCCTTCTTTGTCTTGAATCTTTGCTTTGACATTT 13459 Query 140667 TCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACA 140726 ||||| ||| || ||| || || | |||| |||||| || || ||||| |||||| Sbjct 13458 TCAATGCTATCCGAGCTTTCTACCTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTACA 13399 Query 140727 AAAATCTGCAT 140737 || |||||||| Sbjct 13398 AATATCTGCAT 13388 Score = 165 bits (182), Expect = 2e-35 Identities = 151/191 (79%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 140547 TCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAG 140606 || || || ||||||||||| |||||||||| || ||||| || |||||||| ||||| Sbjct 23162 TCCTTCTGGATATTATAATCTGATAATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAAA 23221 Query 140607 ATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTA 140666 || || | ||||| |||||||||||||||||||| || ||||| || ||||| ||||| Sbjct 23222 ATAAGTCTCTGCTGCTCAGGAGGAATTCCTTCTTTGTCTTGAATCTTTGCTTTGACATTT 23281 Query 140667 TCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACA 140726 ||||| ||| || ||| || || | |||| |||||| || || ||||| |||||| Sbjct 23282 TCAATGCTATCCGAGCTTTCTACCTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTACA 23341 Query 140727 AAAATCTGCAT 140737 || |||||||| Sbjct 23342 AATATCTGCAT 23352 >seq35 Length=128636 Score = 156 bits (172), Expect = 1e-32 Identities = 312/454 (69%), Gaps = 10/454 (2%) Strand=Plus/Minus Query 67804 GATAATGAACGTTCTATTCCAAATTTAATTGATGGTTTTAAAATTAGTTTAAGAAAAATT 67863 ||||| |||||||||||| | |||| |||||||| || | || ||||||| || Sbjct 43845 GATAACATACGTTCTATTCCTTCTGTAATCGATGGTTTAAAGCCTGGTCAAAGAAAAGTT 43786 Query 67864 ATCTATTCGGCATTTAAGAAACGTCTAACTAGTGAAATTAAAGTTGCACAATTTAGT-GG 67922 || | ||| ||||| | | | ||| | |||||| ||||| ||||| | ||| || Sbjct 43785 ATTTTTTCATGTTTTAAAAGAAATTTAAGAAATGAAATAAAAGTAGCACAGCT-AGTAGG 43727 Query 67923 TTATGTTTCAGAACATTCAGGCTATCATCACGGTGAAGCTAGTTTAAATTCATCAATTGT 67982 ||||||||||||||| || | ||||||||||||||||| ||| ||| ||||| | Sbjct 43726 TTATGTTTCAGAACACTCTGCATATCATCACGGTGAAGCATCGTTATCATCAACAATTAT 43667 Query 67983 AGGTTTAGCTCAGAATTTTGTTGGATCAAATAATATTAATTTACTAGAACCAAAAGGTCA 68042 |||||| || | ||||| || || || || ||||| || ||||| ||||| Sbjct 43666 CAATTTAGCGCATGACTTTGTAGGGAGCAACAACATAAATTTGCTTTTACCAATTGGTCA 43607 Query 68043 ATTTGGAACTAGATTACTTGGAGGAAAAGATGCTGCATCTGAAAGATATATATTTACACA 68102 |||||| ||||| | | || || |||||| ||| ||| || || || ||||| | Sbjct 43606 ATTTGGTTCTAGACTTTTGGGGGGTAAAGATAGTGCCTCTCCGAGGTACATTTTTACCAA 43547 Query 68103 TCTAAATACTTTAACTAGA---CTTATCTTTAGACAAGAAGATGATAATATT-CTTGAAT 68158 | ||||| | | || ||| ||| || | ||| | | || | |||| | ||| Sbjct 43546 TTTAAATCCACTTACAAGATTGCTTTTCCATGAACACG-ATATTCCAGTATTACAAGAAC 43488 Query 68159 ATTTAGAAGATGATGGTGATAAAGTTGAGCCAATCTATTATGTTCCTATTATTCCTATGA 68218 | ||||||| | || ||| |||||||| | |||||||| || ||| | || | Sbjct 43487 AGACAGAAGAT-AACATG--AAAATTGAGCCAGTATATTATGTGCCGATTTTACCACTCG 43431 Query 68219 TTTTAGTAAATGGTTCAAAAGGGATTGGCACTGG 68252 |||| ||||||| | |||| ||||| ||||| Sbjct 43430 TTTTGATAAATGGAACTGAAGGAATTGGGACTGG 43397 >seq23 Length=240858 Score = 89.7 bits (98), Expect = 2e-12 Identities = 118/163 (72%), Gaps = 8/163 (5%) Strand=Plus/Plus Query 251167 TCCAATGGTCATTCTACTAGGCAATGCGTGTGGATTAATAATAATATCTGGACGAATTCC 251226 ||| |||||||||||||| || ||||| || ||||| || ||||| || || | | || Sbjct 39281 TCCTATGGTCATTCTACTTGGAAATGCATGGGGATTTATTATAATGTCAGGCTGTAAACC 39340 Query 251227 ATCTTCAGTAAAAGGCAT----ATTTTTCTCATCAATAACTAAACCAATAGTACCTTTTT 251282 || |||||||| ||||| |||| ||| ||| || || || | ||||||| Sbjct 39341 TTCCTCAGTAAATGGCATATCAATTTGACTCCACAAAAAAGAACACACT----CCTTTTT 39396 Query 251283 GTCCACATCTACTACAAAACTTATCTCCAATTGCAGGAATTCT 251325 | || ||| || ||||||||||| ||||| | |||||||| Sbjct 39397 GACCGTGTCTGCTGCAAAACTTATCACCAATCACTGGAATTCT 39439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515253196319786