Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq29 93.3 3e-14 >seq29 Length=110338 Score = 93.3 bits (102), Expect = 3e-14 Identities = 263/394 (67%), Gaps = 19/394 (5%) Strand=Plus/Minus Query 111730 TAAACATGCGCATCTCCTATACAATGGATCAATTCCCAAGGCTCCAAACCAGTGATGTGT 111789 ||||| |||| ||||||||| |||| || ||||| | ||| || | | || | | | Sbjct 17765 TAAACGTGCGTGTCTCCTATAAAATGAATAAATTCACTAGGTTCTAGATTTGTTAATTTT 17706 Query 111790 GCAATCATGTAT-GTGAGTAGACTGTAACTAGCAATGTTAAATGGCACACCTAGGCCCAT 111848 || | || ||| || || | | ||||| ||||||||||| || ||||| | || | Sbjct 17705 GCCACAAT-TATCGTAAGCAAAGCATAACTTGCAATGTTAAAAGGAACACCCAAACCAAC 17647 Query 111849 ATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACATAAAATTG--A 111906 ||| || |||||||| || || || || || || |||| | ||| || | Sbjct 17646 ATCACCTGATCTTTGGTACAGAATGCAGCTTAACTTGTTACCATACACCTTAAAGTGAAA 17587 Query 111907 CAAAGTACATGACAAGGAGGCAATGCCATCCCATTCA----TAAAGGGTCCCCATGCACA 111962 ||||| |||||| || || | |||||| | || | |||||| | ||| ||||| Sbjct 17586 TAAAGT--ATGACACGGTGGAAGTGCCATTTCCTTAAGCTGTAAAGGAT-TCCACGCACA 17530 Query 111963 CATGATCATCCTTCTGCTGTAGCGATTATGT-TCAATGTCGTGTATGACATTCAAGAGCT 112021 || |||| ||||||||| |||| ||| | ||| | | || |||| | |||| Sbjct 17529 CACAATCAGTCTTCTGCTGGTTGGATT-TGTCTTAATTTGCTCAATAACATCCCTAAGCT 17471 Query 112022 GGTCTATCCCTTTACCAGTATAATCCGCCTGACA---TCCAGTGTATGTTGCCCCATAGT 112078 | || || || || || |||| | || || | || |||| ||| ||||| | Sbjct 17470 GATCAATTCCCTTTCCTTCGTAATTTGTCTTGCACGTTTCA---TATGGTGCACCATAAT 17414 Query 112079 GTCTCCATTGGAATCCATAAATAGGCCCCAGATC 112112 ||||||| || || ||||||| ||| ||||| || Sbjct 17413 GTCTCCACTGAAAGCCATAAACAGGTCCCAGGTC 17380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391945303836106