Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq34 107 2e-18 seq32 107 2e-18 >seq34 Length=123199 Score = 107 bits (118), Expect = 2e-18 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 26972 TTTTAATTTATACGCC--ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACT 27029 ||| || || ||| || ||||||||||||||||| || ||||| || ||| | |||||| Sbjct 109831 TTTAAAATTTTACCCCTTATGCAGATATTTGTAAAGACACTGACTGGTAAGACAATTACT 109772 Query 27030 CTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAA 27089 | || || ||| || || ||||| | |||||| ||| ||||||||||||||| Sbjct 109771 TTGGAGGTAGAAAGCTCGGATAGCATTGAAAATGTCAAAGCAAAGATTCAAGACAAAGAA 109712 Query 27090 GGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCG 27149 || || || || || || ||| | | || | || || ||||| |||||||| | Sbjct 109711 GGAATTCCTCCTGAGCAGCAGAGACTTATTTTTGCAGGAAAACAGCTGGAAGACGGAAGA 109652 Query 27150 ACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTG 27200 || | || ||||| || || || ||||| || | || ||||||||| Sbjct 109651 ACATTATCAGATTATAATATCCAGAAGGAAAGCACACTGCACTTGGTTTTG 109601 >seq32 Length=103007 Score = 107 bits (118), Expect = 2e-18 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 26972 TTTTAATTTATACGCC--ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACT 27029 ||| || || ||| || ||||||||||||||||| || ||||| || ||| | |||||| Sbjct 13370 TTTAAAATTTTACCCCTTATGCAGATATTTGTAAAGACACTGACTGGTAAGACAATTACT 13429 Query 27030 CTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAA 27089 | || || ||| || || ||||| | |||||| ||| ||||||||||||||| Sbjct 13430 TTGGAGGTAGAAAGCTCGGATAGCATTGAAAATGTCAAAGCAAAGATTCAAGACAAAGAA 13489 Query 27090 GGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCG 27149 || || || || || || ||| | | || | || || ||||| |||||||| | Sbjct 13490 GGAATTCCTCCTGAGCAGCAGAGACTTATTTTTGCAGGAAAACAGCTGGAAGACGGAAGA 13549 Query 27150 ACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTG 27200 || | || ||||| || || || ||||| || | || ||||||||| Sbjct 13550 ACATTATCAGATTATAATATCCAGAAGGAAAGCACACTGCACTTGGTTTTG 13600 Score = 107 bits (118), Expect = 2e-18 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 26972 TTTTAATTTATACGCC--ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACT 27029 ||| || || ||| || ||||||||||||||||| || ||||| || ||| | |||||| Sbjct 23370 TTTAAAATTTTACCCCTTATGCAGATATTTGTAAAGACACTGACTGGTAAGACAATTACT 23311 Query 27030 CTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAA 27089 | || || ||| || || ||||| | |||||| ||| ||||||||||||||| Sbjct 23310 TTGGAGGTAGAAAGCTCGGATAGCATTGAAAATGTCAAAGCAAAGATTCAAGACAAAGAA 23251 Query 27090 GGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCG 27149 || || || || || || ||| | | || | || || ||||| |||||||| | Sbjct 23250 GGAATTCCTCCTGAGCAGCAGAGACTTATTTTTGCAGGAAAACAGCTGGAAGACGGAAGA 23191 Query 27150 ACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTG 27200 || | || ||||| || || || ||||| || | || ||||||||| Sbjct 23190 ACATTATCAGATTATAATATCCAGAAGGAAAGCACACTGCACTTGGTTTTG 23140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918062938240