Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq34 95.1 9e-15 seq32 95.1 9e-15 >seq34 Length=123199 Score = 95.1 bits (104), Expect = 9e-15 Identities = 151/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || ||||| || || || ||||| || ||||| | || || |||||| | Sbjct 109813 ATGCAGATATTTGTAAAGACACTGACTGGTAAGACAATTACTTTGGAGGTAGAAAGCTCG 109754 Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || || | ||| |||||| ||| || ||||||||||| |||| |||| Sbjct 109753 GATAGCATTGAAAAT--GTCAAAGCAAAGATTCAAGACAAAGAAGGAATTCCTCCTGAGC 109696 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| | | |||||||| |||||||| |||| |||| | | | || || ||||| | Sbjct 109695 AGCAGAGACTTATTTTTGCAGGAAAACAGCTGGAAGACGGAAGAACATTATCAGATTATA 109636 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 | ||||| || || ||||| |||| ||||||||| Sbjct 109635 ATATCCAGAAGGAAAGCACACTGCACTTGGTTTTG 109601 >seq32 Length=103007 Score = 95.1 bits (104), Expect = 9e-15 Identities = 151/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || ||||| || || || ||||| || ||||| | || || |||||| | Sbjct 13388 ATGCAGATATTTGTAAAGACACTGACTGGTAAGACAATTACTTTGGAGGTAGAAAGCTCG 13447 Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || || | ||| |||||| ||| || ||||||||||| |||| |||| Sbjct 13448 GATAGCATTGAAAAT--GTCAAAGCAAAGATTCAAGACAAAGAAGGAATTCCTCCTGAGC 13505 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| | | |||||||| |||||||| |||| |||| | | | || || ||||| | Sbjct 13506 AGCAGAGACTTATTTTTGCAGGAAAACAGCTGGAAGACGGAAGAACATTATCAGATTATA 13565 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 | ||||| || || ||||| |||| ||||||||| Sbjct 13566 ATATCCAGAAGGAAAGCACACTGCACTTGGTTTTG 13600 Score = 95.1 bits (104), Expect = 9e-15 Identities = 151/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || ||||| || || || ||||| || ||||| | || || |||||| | Sbjct 23352 ATGCAGATATTTGTAAAGACACTGACTGGTAAGACAATTACTTTGGAGGTAGAAAGCTCG 23293 Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || || | ||| |||||| ||| || ||||||||||| |||| |||| Sbjct 23292 GATAGCATTGAAAAT--GTCAAAGCAAAGATTCAAGACAAAGAAGGAATTCCTCCTGAGC 23235 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| | | |||||||| |||||||| |||| |||| | | | || || ||||| | Sbjct 23234 AGCAGAGACTTATTTTTGCAGGAAAACAGCTGGAAGACGGAAGAACATTATCAGATTATA 23175 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 | ||||| || || ||||| |||| ||||||||| Sbjct 23174 ATATCCAGAAGGAAAGCACACTGCACTTGGTTTTG 23140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355862131101474