Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq34 159 8e-34 seq32 159 8e-34 >seq34 Length=123199 Score = 159 bits (176), Expect = 8e-34 Identities = 166/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 ||||| | || | ||| || ||| || || ||||| |||||||| | | || ||| Sbjct 109596 AGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAATCTGATAATGTTCTT 109655 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 || ||||||||||| || ||||| || ||||| | || || |||||||||| |||||| Sbjct 109656 CCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGGAGGAATTCCTTCT 109715 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 ||||| || |||||| ||| || ||||| ||| | || |||||||| ||||| | ||| Sbjct 109716 TTGTCTTGAATCTTTGCTTTGACATTTTCAATGCTATCCGAGCTTTCTACCTCCAAAGTA 109775 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || || || ||||||||||| | |||||| Sbjct 109776 ATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCAT 109813 >seq32 Length=103007 Score = 159 bits (176), Expect = 8e-34 Identities = 166/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 ||||| | || | ||| || ||| || || ||||| |||||||| | | || ||| Sbjct 13605 AGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAATCTGATAATGTTCTT 13546 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 || ||||||||||| || ||||| || ||||| | || || |||||||||| |||||| Sbjct 13545 CCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGGAGGAATTCCTTCT 13486 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 ||||| || |||||| ||| || ||||| ||| | || |||||||| ||||| | ||| Sbjct 13485 TTGTCTTGAATCTTTGCTTTGACATTTTCAATGCTATCCGAGCTTTCTACCTCCAAAGTA 13426 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || || || ||||||||||| | |||||| Sbjct 13425 ATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCAT 13388 Score = 159 bits (176), Expect = 8e-34 Identities = 166/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 ||||| | || | ||| || ||| || || ||||| |||||||| | | || ||| Sbjct 23135 AGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAATCTGATAATGTTCTT 23194 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 || ||||||||||| || ||||| || ||||| | || || |||||||||| |||||| Sbjct 23195 CCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGGAGGAATTCCTTCT 23254 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 ||||| || |||||| ||| || ||||| ||| | || |||||||| ||||| | ||| Sbjct 23255 TTGTCTTGAATCTTTGCTTTGACATTTTCAATGCTATCCGAGCTTTCTACCTCCAAAGTA 23314 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || || || ||||||||||| | |||||| Sbjct 23315 ATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCAT 23352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151079198630