Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq34 91.5 1e-13 seq32 91.5 1e-13 >seq34 Length=123199 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || || || || || || || || ||| | || || || | || Sbjct 109813 ATGCAGATATTTGTAAAGACACTGACTGGTAAGACAATTACTTTGGAGGTAGAAAGCTCG 109754 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || | |||||| | ||| ||| ||| ||||||||||| | || || || || Sbjct 109753 GATAGCATTGAAAATGTCAAAGCAAAGATTCAAGACAAAGAAGGAATTCCTCCTGAGCAG 109694 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || ||||| || ||||| |||||||||| | | || ||| ||||| || Sbjct 109693 CAGAGACTTATTTTTGCAGGAAAACAGCTGGAAGACGGAAGAACATTATCAGATTATAAT 109634 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 || || || || |||| | || || ||||| || || |||||||| Sbjct 109633 ATCCAGAAGGAAAGCACACTGCACTTGGTTTTGAGACTGAGAGGAGGA 109586 >seq32 Length=103007 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || || || || || || || || ||| | || || || | || Sbjct 13388 ATGCAGATATTTGTAAAGACACTGACTGGTAAGACAATTACTTTGGAGGTAGAAAGCTCG 13447 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || | |||||| | ||| ||| ||| ||||||||||| | || || || || Sbjct 13448 GATAGCATTGAAAATGTCAAAGCAAAGATTCAAGACAAAGAAGGAATTCCTCCTGAGCAG 13507 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || ||||| || ||||| |||||||||| | | || ||| ||||| || Sbjct 13508 CAGAGACTTATTTTTGCAGGAAAACAGCTGGAAGACGGAAGAACATTATCAGATTATAAT 13567 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 || || || || |||| | || || ||||| || || |||||||| Sbjct 13568 ATCCAGAAGGAAAGCACACTGCACTTGGTTTTGAGACTGAGAGGAGGA 13615 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || || || || || || || || ||| | || || || | || Sbjct 23352 ATGCAGATATTTGTAAAGACACTGACTGGTAAGACAATTACTTTGGAGGTAGAAAGCTCG 23293 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || | |||||| | ||| ||| ||| ||||||||||| | || || || || Sbjct 23292 GATAGCATTGAAAATGTCAAAGCAAAGATTCAAGACAAAGAAGGAATTCCTCCTGAGCAG 23233 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || ||||| || ||||| |||||||||| | | || ||| ||||| || Sbjct 23232 CAGAGACTTATTTTTGCAGGAAAACAGCTGGAAGACGGAAGAACATTATCAGATTATAAT 23173 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 || || || || |||| | || || ||||| || || |||||||| Sbjct 23172 ATCCAGAAGGAAAGCACACTGCACTTGGTTTTGAGACTGAGAGGAGGA 23125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009344591496