Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq36 302 6e-77 >seq36 Length=80385 Score = 302 bits (334), Expect = 6e-77 Identities = 600/883 (68%), Gaps = 8/883 (1%) Strand=Plus/Plus Query 47870 TTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCATAAAATCAAATGGATT 47929 ||| || || ||||| ||||| || ||||| | ||||||||||||||||||||||| Sbjct 37859 TTTATCAAAGAAATTTGTTTTTCCCTCCAAACTCAAGTTTTCCATAAAATCAAATGGATT 37918 Query 47930 AACTGCATTATAAAtttttttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTC 47989 | ||| || | ||||| ||||||| | | | |||||||||||| || ||||| Sbjct 37919 TTTCGTATTGTATACTTTTTGCTCTCCTAATGCATATAACAGTCTATCTGCCACAAATTC 37978 Query 47990 TATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGT 48049 ||| || | ||| | | |||||||||||| || | ||||||||| || || || Sbjct 37979 TATGTACTGTCCCATAAGGTTACAATTCATTCCAATCAAACTAACTGGTAATGCGTCTGT 38038 Query 48050 AAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTATCGATGTTACCGTTTCCTCACT 48109 | |||||||| ||| || || || |||| | ||| | | ||| | || |||| Sbjct 38039 CAAAAACTCTTTTTCTATTTCCACTGCTTCCATAACTATGGCT-TTAATGCTTTTGCACT 38097 Query 48110 TGGTGGATACAACAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATC 48169 | | || | ||| |||| | |||||||||||| ||||||||| || || Sbjct 38098 TATTTC-TAATGTACTTGTGTAAA----AGACATGCAAAATCTGTATGAAGACCCTCGTC 38152 Query 48170 TCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCA 48229 || ||| | ||| || |||||||| || || ||||| | ||| | ||||||||||| Sbjct 38153 CCTGGAAATAAGTTCATTTGAAAATGTTAGTCCTGGCATCAATCCTCTCTTTTTGAGCCA 38212 Query 48230 AAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAG 48289 ||| ||||| || ||||| ||| || || || |||||||| ||||||||| Sbjct 38213 AAAAATTGCAGCAAAAGAACCACTGAAAAAAATTCCTTCTACACACGCAAATGCCACGCA 38272 Query 48290 TCTCTCTCCGTAACTGGCTTCGTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTT 48349 |||| | || | ||| | |||||| ||||||||| || || || ||||| Sbjct 38273 TCTCGTGTCAAAAGAAGTATCGCTTACAATCCACTTTTGTGCCCATTCTGCTTTTTTCTT 38332 Query 48350 TACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAAC 48409 | || || ||||||| |||||||| ||| | |||| || || |||| || Sbjct 38333 AATTGCTGGTATGTTTTCTATTGCATTAAAAAGATAATTTTGCTCTTTATAATCTGGTAC 38392 Query 48410 GTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAA 48469 | || ||||| || ||||||||| || || || ||||| ||||| || ||||| Sbjct 38393 CAATGTTTCTATCAATTTTGAATACATTTCTGAATGTATGTTTTCTATTGCAATTTGAAA 38452 Query 48470 TCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATT 48529 ||||||||||| | ||||| || || || | |||||| ||| | ||||| Sbjct 38453 GCCGTAAAAACACTTTGCTTCCAAAATGGTAACATCATTTGAAAATCTTTCTGATAAATT 38512 Query 48530 CTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTT 48589 |||||||| |||||||| |||||||||||||| | || ||| |||||| ||| Sbjct 38513 TTCATTTACAATTCCATCTGATGCAGCAAAAAATGCAAGAACTCTTTTTATAAAAAATTG 38572 Query 48590 TTCGTTGGAAGTCAGTTTATTCCAGT-CATTGATATCTTTTGATATATCTACTTCTTCAG 48648 ||||| | |||| ||| | | |||| || || | || ||||||||||| Sbjct 38573 CTCGTTTTTGTTGAGTTGATTAAAATGCATT-ATGTCAAAAGTTAAGTCTACTTCTTCTA 38631 Query 48649 CTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACTGTATTGGATTG 48708 | |||||||| | | || ||||||||| | || |||||| || ||||| |||| Sbjct 38632 CAGTCCAAAAAGTAGATTCGTGTTTTTTATAAAAATCCCATATTTCTTGATATTGTATTG 38691 Query 48709 GGAAAATAACAAATCTATTTGGATTTTTTGCAAGGATAGGTTC 48751 | || | |||| | || || |||| | |||| | ||||| Sbjct 38692 GAAATAAAACATACCTCTTGTGATTCTGGTCAAGAAGTGGTTC 38734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668261631680