Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq36 327 2e-84 >seq36 Length=80385 Score = 327 bits (362), Expect = 2e-84 Identities = 607/885 (69%), Gaps = 12/885 (1%) Strand=Plus/Plus Query 46359 TTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCATAAAATCAAACGGATT 46418 ||| || || ||||| ||||| || ||||| | ||||||||||||||||| ||||| Sbjct 37859 TTTATCAAAGAAATTTGTTTTTCCCTCCAAACTCAAGTTTTCCATAAAATCAAATGGATT 37918 Query 46419 AGTAACATTATAAAtttttttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTC 46478 | ||| || | ||||| ||||||| | | | |||||||||||| || ||||| Sbjct 37919 TTTCGTATTGTATACTTTTTGCTCTCCTAATGCATATAACAGTCTATCTGCCACAAATTC 37978 Query 46479 TATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTTTGACCGGTAGAGCCTCCGT 46538 ||| ||| | ||| | | |||||||||||| || | | || |||| || || || Sbjct 37979 TATGTACTGTCCCATAAGGTTACAATTCATTCCAATCAAACTAACTGGTAATGCGTCTGT 38038 Query 46539 AAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATCGATGTTACTGTTTCCTCACT 46598 | |||||||| ||| || || || ||| | ||| | | ||| || || |||| Sbjct 38039 CAAAAACTCTTTTTCTATTTCCACTGCTTCCATAACTATGGCT-TTAATGCTTTTGCACT 38097 Query 46599 TGGTGG--ATGCATCAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGGCCTTCA 46656 | | ||| | ||| |||| | |||||||||||| |||||| || || Sbjct 38098 TATTTCTAATGTACT---TGTGTAAA----AGACATGCAAAATCTGTATGAAGACCCTCG 38150 Query 46657 TCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGC 46716 || || ||| | ||| || |||||||| || || ||||| | ||| | |||||||||| Sbjct 38151 TCCCTGGAAATAAGTTCATTTGAAAATGTTAGTCCTGGCATCAATCCTCTCTTTTTGAGC 38210 Query 46717 CAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACA 46776 ||||| || || || ||||| ||| || || || ||||||||| ||| ||||| || Sbjct 38211 CAAAAAATTGCAGCAAAAGAACCACTGAAAAAAATTCCTTCTACACACGCAAATGCCACG 38270 Query 46777 AGTCTCTCTCCGTAACTGGCATCATTATGAATCCACCTTTGAGCCCAATCAGCCTTTTTC 46836 |||| | || | ||| | ||||||| |||| ||||| || || |||||| Sbjct 38271 CATCTCGTGTCAAAAGAAGTATCGCTTACAATCCACTTTTGTGCCCATTCTGCTTTTTTC 38330 Query 46837 TTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTA 46896 || | || || ||||||| |||||||| ||| | |||| || | | |||| Sbjct 38331 TTAATTGCTGGTATGTTTTCTATTGCATTAAAAAGATAATTTTGCTCTTTATAATCTGGT 38390 Query 46897 ACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGA 46956 || |||| ||||| || ||||||||||||||| |||||||| || || || ||| Sbjct 38391 ACCAATGTTTCTATCAATTTTGAATACATTTCTGAATGTATGTTTTCTATTGCAATTTGA 38450 Query 46957 AATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAA 47016 || ||||||||||| ||||||| ||| || || | |||||| ||| || ||| Sbjct 38451 AAGCCGTAAAAACACTTTGCTTCCAAAATGGTAACATCATTTGAAAATCTTTCTGATAAA 38510 Query 47017 TTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATAT 47076 || ||||| || |||||||| |||||||||||||| | || ||| |||||| || Sbjct 38511 TTTTCATTTACAATTCCATCTGATGCAGCAAAAAATGCAAGAACTCTTTTTATAAAAAAT 38570 Query 47077 TTTTCATCGGTAGTCAGTTTATTCCAGT-CATTGATATCTTTTGATATATCTACTTCTTC 47135 | || | | | |||| ||| | | |||| || || | || ||||||||||| Sbjct 38571 TGCTCGTTTTTGTTGAGTTGATTAAAATGCATT-ATGTCAAAAGTTAAGTCTACTTCTTC 38629 Query 47136 AGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACGATATTGGAT 47195 | ||||| || | | || ||||||||| | || |||||| || ||||||| || Sbjct 38630 TACAGTCCAAAAAGTAGATTCGTGTTTTTTATAAAAATCCCATATTTCTTGATATTGTAT 38689 Query 47196 CGGAAAAATAACAAATCTATTTGGATTTTTTGCAAGTATAGGTTC 47240 ||||| | |||| | || || |||| | |||| | ||||| Sbjct 38690 TGGAAATAAAACATACCTCTTGTGATTCTGGTCAAGAAGTGGTTC 38734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712933847475840