Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq34 104 5e-17 seq32 104 5e-17 >seq34 Length=123199 Score = 104 bits (114), Expect = 5e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 282903 GTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCG 282962 |||||||| || ||||| || || || | | || | || || || || ||||| || Sbjct 109617 GTGCTTTCCTTCTGGATATTATAATCTGATAATGTTCTTCCGTCTTCCAGCTGTTTTCCT 109676 Query 282963 GCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTT 283022 ||||| || | | || || ||| ||||| || || |||||||| ||||||||||| Sbjct 109677 GCAAAAATAAGTCTCTGCTGCTCAGGAGGAATTCCTTCTTTGTCTTGAATCTTTGCTTTG 109736 Query 283023 ACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTC 283082 || | || || | ||||| ||| || || | ||| || |||||||| |||| ||| Sbjct 109737 ACATTTTCAATGCTATCCGAGCTTTCTACCTCCAAAGTAATTGTCTTACCAGTCAGTGTC 109796 Query 283083 TTAACGAATATCTGCAT 283099 || || ||||||||||| Sbjct 109797 TTTACAAATATCTGCAT 109813 >seq32 Length=103007 Score = 104 bits (114), Expect = 5e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 282903 GTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCG 282962 |||||||| || ||||| || || || | | || | || || || || ||||| || Sbjct 13584 GTGCTTTCCTTCTGGATATTATAATCTGATAATGTTCTTCCGTCTTCCAGCTGTTTTCCT 13525 Query 282963 GCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTT 283022 ||||| || | | || || ||| ||||| || || |||||||| ||||||||||| Sbjct 13524 GCAAAAATAAGTCTCTGCTGCTCAGGAGGAATTCCTTCTTTGTCTTGAATCTTTGCTTTG 13465 Query 283023 ACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTC 283082 || | || || | ||||| ||| || || | ||| || |||||||| |||| ||| Sbjct 13464 ACATTTTCAATGCTATCCGAGCTTTCTACCTCCAAAGTAATTGTCTTACCAGTCAGTGTC 13405 Query 283083 TTAACGAATATCTGCAT 283099 || || ||||||||||| Sbjct 13404 TTTACAAATATCTGCAT 13388 Score = 104 bits (114), Expect = 5e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 282903 GTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCG 282962 |||||||| || ||||| || || || | | || | || || || || ||||| || Sbjct 23156 GTGCTTTCCTTCTGGATATTATAATCTGATAATGTTCTTCCGTCTTCCAGCTGTTTTCCT 23215 Query 282963 GCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTT 283022 ||||| || | | || || ||| ||||| || || |||||||| ||||||||||| Sbjct 23216 GCAAAAATAAGTCTCTGCTGCTCAGGAGGAATTCCTTCTTTGTCTTGAATCTTTGCTTTG 23275 Query 283023 ACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTC 283082 || | || || | ||||| ||| || || | ||| || |||||||| |||| ||| Sbjct 23276 ACATTTTCAATGCTATCCGAGCTTTCTACCTCCAAAGTAATTGTCTTACCAGTCAGTGTC 23335 Query 283083 TTAACGAATATCTGCAT 283099 || || ||||||||||| Sbjct 23336 TTTACAAATATCTGCAT 23352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046738368496548