Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq36 246 3e-60 >seq36 Length=80385 Score = 246 bits (272), Expect = 3e-60 Identities = 544/803 (68%), Gaps = 26/803 (3%) Strand=Plus/Plus Query 23160 TTAAAAATCTTCATCTAAAGTGAATTTCACTGCTTTATCACTATTCATA-ACACCCATTT 23218 ||||||||| |||| |||| | || || | | |||||| || | || | | || || Sbjct 37784 TTAAAAATCCTCATTTAAATTAAACTTAAAATCATTATCAATA--CCTACATATCC--TT 37839 Query 23219 TTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTTT 23278 | ||||| | | | | | || || |||||||| || ||||| || | |||| Sbjct 37840 TCTGATAATTTGCTTCTTTTTTATCAAAGAAATTTGTTTTTCCCTCCAAACTCAAGTTTT 37899 Query 23279 CCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGATAATTCCTTTAAAA 23338 ||||||||||||||||||| ||||| ||||| || | |||| | | ||| | Sbjct 37900 CCATAAAATCAAATGGATTTTTCGTATTGTATACTTTTTGCTCTCCTAATGCATATAACA 37959 Query 23339 GCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTT 23398 | |||||||| |||||||| || || || | ||| | | | | || || || || | Sbjct 37960 GTCTATCTGCCACAAATTCTATGTACTGTCCCATAAGGTTACAATTCATTCCAATCAAAC 38019 Query 23399 TTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTT 23458 | ||||| | || || || || |||||| || || || || ||| ||| Sbjct 38020 TAACTGGTAATGCGTCTGTCAAAAACTCTTTTTCTATTTCCACTGCTTCCATAACTATGG 38079 Query 23459 GAACAATAACTTCTTCACTAGGTGGATATTTTAAAT--ACTTAAACAATAAACATGCAAA 23516 ||| ||| | |||| ||||| ||| |||| || | ||||||||| Sbjct 38080 CTTTAATG-CTTTTGCACT-------TATTTCTAATGTACTTGTGTAAAAGACATGCAAA 38131 Query 23517 ATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCAT 23576 ||| ||| || || || ||||| ||| | |||||| |||||||||| ||||||||| Sbjct 38132 ATCTGTATGAAGACCCTCGTCCCTGGAAATAAGTTCATTTGAAAATGTTAGTCCTGGCAT 38191 Query 23577 TAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTC 23636 ||||||| ||||| | |||||| ||||||||||| || || || ||||| || || Sbjct 38192 CAATCCTCTCTTTTTGAGCCAAAAAATTGCAGCAAAAGAACCACTGAAAAAAATTCCTTC 38251 Query 23637 AACAGCCGCAAAGGCCA--CAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAt 23694 ||| |||||| |||| || ||||| |||| | | ||| |||||| Sbjct 38252 TACACACGCAAATGCCACGCATCTCGTGT--CAAA---AGAAGTATCGCTTACAATCCAC 38306 Query 23695 ttttttGTCCAATTAGCCTTCAATTTTACACACT-CAATTGTTTCAATTGCTTTTAAGAG 23753 |||| || || ||| ||| | ||| || || |||| ||||| || || || Sbjct 38307 TTTTGTG-CCCATTCTGCTTTTTTCTTAATTGCTGGTATGTTTTCTATTGCATTAAAAAG 38365 Query 23754 AAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGA 23813 | || ||| |||| || ||||| || |||| || || | | ||||||||| || Sbjct 38366 ATAATTTTGCTCTTTATAATCTGGTACCAATGTTTCTATCAATTTTGAATACATTTCTGA 38425 Query 23814 ATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTG-AA 23872 ||| || ||||| || ||||| ||||| || |||||||| | ||||| | ||| | || Sbjct 38426 ATGTATGTTTTCTATTGCAATTTGAAAGCCGTAAAAACACTTTGCTTC-CAAAATGGTAA 38484 Query 23873 CATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGA 23932 ||||||| ||||||||| | ||||||||| || ||||| ||||| |||||||| | Sbjct 38485 CATCATTTGAAAATCTTTCTGATAAATTTTCATTTACAATTCCATCTGATGCAGCAAAAA 38544 Query 23933 AAGCAAGAACATATTTTATAAAA 23955 | |||||||| |||||||||| Sbjct 38545 ATGCAAGAACTCTTTTTATAAAA 38567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521487595846800