Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterospora_20canceri_20[genbank_20GCA_5F002087915.1_202017-04-12] 537 sequences; 3,095,385 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq347 132 6e-26 >seq347 Length=13642 Score = 132 bits (146), Expect = 6e-26 Identities = 549/854 (64%), Gaps = 24/854 (3%) Strand=Plus/Plus Query 23901 TTTTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCC--AATTCAG 23958 || ||||||||||| ||||||| | |||| | | | ||| | |||| ||| | Sbjct 4713 TTGTCCATGAAATCAAATGGATTCTCAGCATTGAACA--CCTTTGACTCCCCCAATGCGT 4770 Query 23959 AAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTA 24018 | | || || ||||| |||||||| |||||| |||||| | | ||||| || | Sbjct 4771 AGAGCAGCCTGTCTGCTACAAACTCAATATATTGGCTCATCAACTTCGAGTTCATCCCAA 4830 Query 24019 TAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTA 24078 | || | |||||| | | | |||| ||||| || | || || || || ||| | | Sbjct 4831 TCAGGTCAACTGGCAATGACTCAGTCAGAAACTCCTTCTCGATCACAACGGCCTCTTTCA 4890 Query 24079 TAATAGATCTTACTGTT--TCTT-CACTCGGTGGATACAATAAATGTTTAAACATCAAAC 24135 ||||| | || | |||| |||| || | | || | | || | || Sbjct 4891 C----GATCTGAGTGATGTTCTTGCACTTTTTGTTGA---TGTATTTGTGAAGG--AGAC 4941 Query 24136 ATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTC 24195 | ||||| ||||| || || |||||||| || ||||| | || || || || | | Sbjct 4942 AGGCGAAGTCGCAATGGAGTCCCTCGTCCCTGCTAATCAGCTCATTTGAGAAGCACAAAC 5001 Query 24196 CGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAA 24255 | ||||| | || | ||| || | ||| ||||||| |||||||||||| |||||||| Sbjct 5002 CAGGCATCAATCCCCTCTTCTTCATCCAGAATATGGCAGCAAATGATCCACTAAAGAAAA 5061 Query 24256 TTCCTTCTACTGCCGCAAAGGCAATAAGTCT-TTCTCCA--TAACCGGCGCTGTCATGTA 24312 |||| || || ||||| |||| | ||| | || | | | || ||| | Sbjct 5062 TTCCCTCAACACAGGCAAATGCAACCATTCTCGTATCAAATGATTCAGCAGACTCA---A 5118 Query 24313 TCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAA 24372 ||||| | |||||||| ||||||||| || || || | || | ||||||| Sbjct 5119 TCCACCTCATTGCCCAATCTGCCTTCTTTCGTATTGCTGGAATATTGTCAACTGCATTAA 5178 Query 24373 AGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTT 24432 | || ||| || ||| | |||| ||| ||| ||||||| || ||||| | Sbjct 5179 ATAGGAAGTCTTGTTCCGTTTTATCGCAAACCAGTGTCTCAATCAGCTTGCTGTACATCT 5238 Query 24433 CCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCT 24492 | || || ||||| ||||| || || ||||| |||||||| || | || || | | Sbjct 5239 CAGAGTGGATGTTCTCAATTGCAATCTGAAACCCGTAGAAGCACTTGGCTTCAAGCA-CA 5297 Query 24493 GT-ACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 24551 || || || | | || | ||| || | || ||||| || ||||| || ||| ||| Sbjct 5298 GTCACGTCGTTGGAGAACCTTTCGGCCAGGTTCTCATTTACAATTCCATCTGAGGCAGCA 5357 Query 24552 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCA 24611 || || || | || || || || || || | ||| | || | || || ||| Sbjct 5358 AAGAAGGCAAGAACGTGCTTGATGAAGTACTGTTCATTTGCATTAAGGGAGTTGAAATGC 5417 Query 24612 TTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTA 24671 | || ||| | || || || ||||| || ||||| || | | ||| ||| || Sbjct 5418 TGGAGATCAAATGTCATGTCGACCTCTTCTACGGTCCAGAAGGTGGACTCGTGCTTCTTG 5477 Query 24672 TACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTGGATTTTTT 24731 || | | |||||| ||| |||| ||||||||||| || || | || ||| | | || Sbjct 5478 TAGAACTCCCAGATCTCAGGATACTGAATTGGAAACATCACGTACCTCTTTTGGTCTTCG 5537 Query 24732 GCAAGGATTGGTTC 24745 |||| | ||| || Sbjct 5538 TCAAGCAGTGGCTC 5551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593717614643760