Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterospora_20canceri_20[genbank_20GCA_5F002087915.1_202017-04-12] 537 sequences; 3,095,385 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq351 100 3e-16 seq347 98.7 1e-15 >seq351 Length=13504 Score = 100 bits (110), Expect = 3e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| | ||||| || || ||||| || || || ||||| | || || ||| | | Sbjct 4642 AATGCAGGTGTTCGTGAAGACACTCACAGGAAAGACAATCACACTTGAGGTTGAATCGAG 4701 Query 40749 CGACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||| | || || | | |||| || || | ||||| |||||||| || | |||| Sbjct 4702 TGACACGATTGAGAATG-TGAAGGCGAAGATACAGGACAAGGAGGGCATTCCTCCAGACC 4760 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||| | || || | || ||||| ||||| || |||| | || || | ||||||| Sbjct 4761 AGCAGAGGCTGATATTTGCTGGCAAGCAGCTTGAAGACGGTAGGACACTGAGTGACTACA 4820 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||||||||| |||||| || || || ||||| Sbjct 4821 ACATCCAGAAGGAGAGCACGCTCCACCTTGTTTTGCG 4857 >seq347 Length=13642 Score = 98.7 bits (108), Expect = 1e-15 Identities = 199/293 (68%), Gaps = 2/293 (1%) Strand=Plus/Minus Query 116604 GGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTACAAAAAGGCCGAGG 116663 ||| |||||| || || || || || || || || ||| | ||||| ||| |||| Sbjct 5523 GGTACGTGATGTTTCCAATTCAGTATCCTGAGATCTGGGAGTTCTACAAGAAGCACGAGT 5464 Query 116664 CGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGA-CACGAGCGACTGGGAGCGC 116722 | | ||||||||||| || ||||| ||| || | || | | ||| | | | Sbjct 5463 CCACCTTCTGGACCGTAGAAGAGGTCGACATGACATTTGATCTCCAGCATTTCAACTCCC 5404 Query 116723 TTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGAC 116782 || || | || || | | |||||||||||||| || ||||| || || ||| || Sbjct 5403 TT-AATGCAAATGAACAGTACTTCATCAAGCACGTTCTTGCCTTCTTTGCTGCCTCAGAT 5345 Query 116783 GGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCG 116842 || || || || ||||| |||| ||| | ||| | | || ||| ||| || || Sbjct 5344 GGAATTGTAAATGAGAACCTGGCCGAAAGGTTCTCCAACGACGTGACTGTGCTTGAAGCC 5285 Query 116843 CGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTA 116895 |||||||||||| |||||||| || || |||||| | ||||| || ||||| Sbjct 5284 AAGTGCTTCTACGGGTTTCAGATTGCAATTGAGAACATCCACTCTGAGATGTA 5232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515215741591120