Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterospora_20canceri_20[genbank_20GCA_5F002087915.1_202017-04-12] 537 sequences; 3,095,385 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq307 125 8e-24 seq351 111 2e-19 >seq307 Length=79363 Score = 125 bits (138), Expect = 8e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || || | ||| | || ||||| |||| |||||||||||| ||||| || || || Sbjct 60856 CCACCACGTAATCTCAGTACCAAGTGCAGTGTGCTCTCCTTCTGAATGTTATAGTCGCTT 60915 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || |||| | || || |||||||| ||||| || ||||| | ||||||||| | || Sbjct 60916 AGCGTCCTGCCATCTTCAAGCTGCTTTCCAGCAAAGATGAGCCTCTGCTGGTCTGGTGGA 60975 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | | ||||||||| ||| | |||| || | || | | |||||| ||||| ||||| Sbjct 60976 ATTCCTTCCTTGTCC-TGAATCTTTGCCTTTACGTTCTCGATCGTGTCACTCGACTCCAC 61034 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | |||||| || || || || |||||||| ||||| | |||||| Sbjct 61035 TTCCAGCGTGATTGTCTTTCCTGTCAGCGTCTTCACAAATACTTGCAT 61082 >seq351 Length=13504 Score = 111 bits (122), Expect = 2e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028 ||||| || | || | ||||||||||| || || ||||| ||| ||| |||| || Sbjct 4857 CGCAAAACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCACTCAGTGTCCTACCG 4798 Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088 || || |||||||| ||||| ||||| || | ||||||||| | || | || ||||||| Sbjct 4797 TCTTCAAGCTGCTTGCCAGCAAATATCAGCCTCTGCTGGTCTGGAGGAATGCCCTCCTTG 4738 Query 43089 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 43148 ||| || || || | || | | |||||| |||||||| || || | ||||| Sbjct 4737 TCCTGTATCTTCGCCTTCACATTCTCAATCGTGTCACTCGATTCAACCTCAAGTGTGATT 4678 Query 43149 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || || || || || ||||| || || | |||||| Sbjct 4677 GTCTTTCCTGTGAGTGTCTTCACGAACACCTGCATT 4642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571813761674360