Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterospora_20canceri_20[genbank_20GCA_5F002087915.1_202017-04-12] 537 sequences; 3,095,385 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq347 107 2e-18 >seq347 Length=13642 Score = 107 bits (118), Expect = 2e-18 Identities = 310/468 (66%), Gaps = 27/468 (6%) Strand=Plus/Plus Query 14203 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 14262 ||| || || || ||||| || ||||| || || ||||| || || ||||| || || Sbjct 4940 ACAGGCGAAGTCGCAATGGAGTCCCTCGTCCCTGCTAATCAGCTCATTTGAGAAGCACAA 4999 Query 14263 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAA 14322 || ||||||||||| | || || | ||| ||||| ||||| |||||||| |||||| Sbjct 5000 ACCAGGCATCAATCCCCTCTTCTTCATCCAGAATATGGCAGCAAATGATCCACTAAAGAA 5059 Query 14323 TATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAAC-GATGCTTTTTTGTTCG 14381 ||||||||||| ||||| || || | ||||| | | ||| || | Sbjct 5060 AATTCCCTCAACACAGGCAAATGC----AACCATTCTCGTATCAAATGATTCAGCAGACT 5115 Query 14382 ATATCCATTTTCTAGCCCATTCAGAttttttt----ttAATAAAATCCATTGTTTCAATA 14437 ||||| | | ||||| || | || ||| || | ||| |||| |||| Sbjct 5116 CAATCCACCTCATTGCCCAATCTGCCTTCTTTCGTATTGCTGGAAT--ATTG--TCAACT 5171 Query 14438 GCATTAAATA--AA----TGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGT 14491 |||||||||| || |||||| | |||| | ||| ||| ||||| || Sbjct 5172 GCATTAAATAGGAAGTCTTGTTCCGT---TTTATCGC---AAACCAGTGTCTCAATCAGC 5225 Query 14492 AAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTA 14551 ||| ||||| |||||||| ||||| || || || |||||||| || || || || | Sbjct 5226 TTGCTGTACATCTCAGAGTGGATGTTCTCAATTGCAATCTGAAACCCGTAGAAGCACTTG 5285 Query 14552 GCTTCTGACCATTGT-ACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACC 14610 ||||| | || || || || | | || |||||||||| || ||||| || || || Sbjct 5286 GCTTC-AAGCACAGTCACGTCGTTGGAGAACCTTTCGGCCAGGTTCTCATTTACAATTCC 5344 Query 14611 ATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTC 14658 ||| || ||||| || || | | || || || ||||| || || Sbjct 5345 ATCTGAGGCAGCAAAGAAGGCAAGAACGTGCTTGATGAAGTACTGTTC 5392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482342362255160