Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterospora_20canceri_20[genbank_20GCA_5F002087915.1_202017-04-12] 537 sequences; 3,095,385 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq347 107 4e-18 >seq347 Length=13642 Score = 107 bits (118), Expect = 4e-18 Identities = 217/320 (68%), Gaps = 13/320 (4%) Strand=Plus/Minus Query 101914 AATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTT 101973 ||| ||||| ||||| ||||| ||||| ||||||||||| |||| || |||| || Sbjct 5090 AATGGTTGCATTTGCCTGTGTTGAGGGAATTTTCTTTAGTGGATCATTTGCTGCCATATT 5031 Query 101974 CTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAG 102033 |||||| ||||| ||||| | |||||||| | || ||| |||||| | ||| || Sbjct 5030 CTGGATGAAGAAGAGGGGATTGATGCCTGGTTTGTGCTTCTCAAATGAGCTGATTAGCAG 4971 Query 102034 GGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATAC 102093 |||||| || || ||| ||||||| || || | | || | ||| | || | Sbjct 4970 GGACGAGGGACTCCATTGCGACTTCGCCTGTCTCC--TTCACAAA--------TACAT-C 4922 Query 102094 CCCATCAAGAGAAAG--GATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAA 102151 || ||| | ||| || | | || || | || ||||| || || | || Sbjct 4921 AACAAAAAGTGCAAGAACATCACTCAGATCGTGAAAGAGGCCGTTGTGATCGAGAAGGAG 4862 Query 102152 TTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAG 102211 ||||| || | || |||| ||| | | | || ||||||| |||||||||||||| Sbjct 4861 TTTCTGACTGAGTCATTGCCAGTTGACCTGATTGGGATGAACTCGAAGTTGATGAGCCAA 4802 Query 102212 TACATTGAATTTGTGGCAGA 102231 || ||||| ||||| ||||| Sbjct 4801 TATATTGAGTTTGTAGCAGA 4782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989577191352835