Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterospora_20canceri_20[genbank_20GCA_5F002087915.1_202017-04-12] 537 sequences; 3,095,385 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq347 105 6e-18 >seq347 Length=13642 Score = 105 bits (116), Expect = 6e-18 Identities = 390/599 (65%), Gaps = 28/599 (5%) Strand=Plus/Plus Query 11629 ACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAA 11688 ||| || || || ||||| | || ||||| || || || || ||||| || || || Sbjct 4940 ACAGGCGAAGTCGCAATGGAGTCCCTCGTCCCTGCTAATCAGCTCATTTGAGAAGCACAA 4999 Query 11689 TCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAA 11748 || ||||||||||| | || || ||||| ||||| ||||||||||| ||| |||||| Sbjct 5000 ACCAGGCATCAATCCCCTCTTCTTCATCCAGAATATGGCAGCAAATGATCCACTAAAGAA 5059 Query 11749 TATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATACCTTGTTGC--TAGA- 11805 |||||||| ||| |||||||| || | ||| | ||| || | | ||| Sbjct 5060 AATTCCCTCAACACAGGCAAATGCAACCATTCT-----CGTATCAAATGATTCAGCAGAC 5114 Query 11806 --TATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCC----ATTGTTTCTAT 11859 ||||| | | |||||||| || |||||| || ||| | || | || | Sbjct 5115 TCAATCCACCTCATTGCCCAATCTGCCTTCTTT----CGTATTGCTGGAATATTGTCAAC 5170 Query 11860 AGCGTTAAATA--AATGCATTTTTTCTATATTATCTCTTACATATGTATCTATTAATAAA 11917 || ||||||| || | || ||| | ||||| | || ||| || || | Sbjct 5171 TGCATTAAATAGGAAGTC--TTGTTCCGTTTTATCGCAAACCAGTGTCTCAATCAGCTTG 5228 Query 11918 CTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCC 11977 || ||||| || || || || || || || || || ||||| || ||||| || | || | Sbjct 5229 CTGTACATCTCAGAGTGGATGTTCTCAATTGCAATCTGAAACCCGTAGAAGCA-CTTGGC 5287 Query 11978 TCTGAACACTGT-ACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATC 12036 | | ||| || || || | || ||||| || | |||||||||||||| ||||| Sbjct 5288 TTCAAGCACAGTCACGTCGTTGGAGAACCTTTCGGCCAGGTTCTCATTTACAATTCCATC 5347 Query 12037 ACTAGATGCAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGTTAATTT 12096 | ||||| || || || | || || || ||||| | ||| | || |||| Sbjct 5348 TGAGGCAGCAAAGAAGGCAAGAACGTGCTTGATGAAGTACTGTTCAT-TTGCATTAAGGG 5406 Query 12097 A-TCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTGCCA 12155 | | ||| | | ||| || | || || ||||| |||||||| || | | | Sbjct 5407 AGTTGAAATGCTGGAGATCAAATGTCATGTCGACCTCTTCTACGGTCCAGAAGGTGGACT 5466 Query 12156 C-TGATTGTTTATACATTTTCCAGATATCATGATACTTAATAGGGAAAATAACGAACCT 12213 | || || || || | | |||||| ||| |||||| ||| || || || ||| |||| Sbjct 5467 CGTGCTT-CTTGTAGAACTCCCAGATCTCAGGATACTGAATTGGAAACATCACGTACCT 5524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468521655027280