Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterospora_20canceri_20[genbank_20GCA_5F002087915.1_202017-04-12] 537 sequences; 3,095,385 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq347 149 8e-31 >seq347 Length=13642 Score = 149 bits (164), Expect = 8e-31 Identities = 406/616 (66%), Gaps = 8/616 (1%) Strand=Plus/Plus Query 36157 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 36216 ||| ||||| ||||| || || |||||||| || ||||| | || || || || | Sbjct 4940 ACAGGCGAAGTCGCAATGGAGTCCCTCGTCCCTGCTAATCAGCTCATTTGAGAAGCACAA 4999 Query 36217 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 36276 || ||||| | || | ||| || | ||| ||||||| |||||||||||| |||||| Sbjct 5000 ACCAGGCATCAATCCCCTCTTCTTCATCCAGAATATGGCAGCAAATGATCCACTAAAGAA 5059 Query 36277 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTC-TCTCCA--TAACCGGCACTGTCATG 36333 |||||| || || ||||| |||| | |||| | || | | | ||| ||| Sbjct 5060 AATTCCCTCAACACAGGCAAATGCAACCATTCTCGTATCAAATGATTCAGCAGACTCA-- 5117 Query 36334 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 36393 |||||| | |||||||| ||||||||| || || || | || | ||||| Sbjct 5118 -ATCCACCTCATTGCCCAATCTGCCTTCTTTCGTATTGCTGGAATATTGTCAACTGCATT 5176 Query 36394 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACAT 36453 ||| || ||| || ||| | |||| ||| ||| ||||||| || ||||| Sbjct 5177 AAATAGGAAGTCTTGTTCCGTTTTATCGCAAACCAGTGTCTCAATCAGCTTGCTGTACAT 5236 Query 36454 TTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 36513 || || || ||||| ||||| || || ||||| |||||||| || | || || | Sbjct 5237 CTCAGAGTGGATGTTCTCAATTGCAATCTGAAACCCGTAGAAGCACTTGGCTTCAAGCA- 5295 Query 36514 CTGT-ACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTG 36572 | || || || | | || | ||| || | || ||||| || ||||| || ||| | Sbjct 5296 CAGTCACGTCGTTGGAGAACCTTTCGGCCAGGTTCTCATTTACAATTCCATCTGAGGCAG 5355 Query 36573 CAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATTCCAAT 36632 |||| || || | || || || || || || | ||| |||| | || || ||| Sbjct 5356 CAAAGAAGGCAAGAACGTGCTTGATGAAGTACTGTTCATTTGCATTAAGGGAGTTGAAAT 5415 Query 36633 CATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTT 36692 | || ||| | || || || ||||| || ||||| || | | ||| ||| | Sbjct 5416 GCTGGAGATCAAATGTCATGTCGACCTCTTCTACGGTCCAGAAGGTGGACTCGTGCTTCT 5475 Query 36693 TATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTTGATTTT 36752 | || | | |||||| ||| |||| ||||||||||| || || | || ||||| | || Sbjct 5476 TGTAGAACTCCCAGATCTCAGGATACTGAATTGGAAACATCACGTACCTCTTTTGGTCTT 5535 Query 36753 TTGCAAGGATTGGTTC 36768 |||| | ||| || Sbjct 5536 CGTCAAGCAGTGGCTC 5551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658168382015080