Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterospora_20canceri_20[genbank_20GCA_5F002087915.1_202017-04-12] 537 sequences; 3,095,385 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq347 113 4e-20 >seq347 Length=13642 Score = 113 bits (124), Expect = 4e-20 Identities = 306/462 (66%), Gaps = 15/462 (3%) Strand=Plus/Plus Query 13871 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 13930 ||| || || || ||||| || ||||| || || ||||| || || ||||| || || Sbjct 4940 ACAGGCGAAGTCGCAATGGAGTCCCTCGTCCCTGCTAATCAGCTCATTTGAGAAGCACAA 4999 Query 13931 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAA 13990 || ||||||||||| | || || | ||| ||||| ||||||||||| || |||||| Sbjct 5000 ACCAGGCATCAATCCCCTCTTCTTCATCCAGAATATGGCAGCAAATGATCCACTAAAGAA 5059 Query 13991 TATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAAC-GATGCTTTTTTGTTCG 14049 ||||||||||| ||||| || || | ||||| | | ||| || | Sbjct 5060 AATTCCCTCAACACAGGCAAATGC----AACCATTCTCGTATCAAATGATTCAGCAGACT 5115 Query 14050 ATATCCATTTTCTAGCCCATTCAGAttttttt----ttAATAAAATCCATTGTTTCAATA 14105 ||||| | | ||||| || | || ||| || | ||| |||| |||| Sbjct 5116 CAATCCACCTCATTGCCCAATCTGCCTTCTTTCGTATTGCTGGAAT--ATTG--TCAACT 5171 Query 14106 GCATTAAATAAATATTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTA 14165 |||||||||| | || | || | || ||| ||| ||||| || ||| Sbjct 5172 GCATTAAATAGGAAGTCTTGTTCCGTTTTATCGCAAACCAGTGTCTCAATCAGCTTGCTG 5231 Query 14166 TACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCC 14225 ||||| |||||||| ||||| || || || |||||||| || || ||||| | |||| | Sbjct 5232 TACATCTCAGAGTGGATGTTCTCAATTGCAATCTGAAACCCGTAGAAGCACTTGGCTT-C 5290 Query 14226 GACCATTGT-ACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACT 14284 | || || || || | | || |||||||||| || ||||| || || ||||| Sbjct 5291 AAGCACAGTCACGTCGTTGGAGAACCTTTCGGCCAGGTTCTCATTTACAATTCCATCTGA 5350 Query 14285 AGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTC 14326 || ||||| || || | | || || || ||||| || || Sbjct 5351 GGCAGCAAAGAAGGCAAGAACGTGCTTGATGAAGTACTGTTC 5392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479724779825800