Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterospora_20canceri_20[genbank_20GCA_5F002087915.1_202017-04-12] 537 sequences; 3,095,385 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq347 104 2e-17 >seq347 Length=13642 Score = 104 bits (114), Expect = 2e-17 Identities = 312/471 (66%), Gaps = 33/471 (7%) Strand=Plus/Plus Query 13659 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 13718 ||| || || || ||||| || ||||| || || ||||| || || ||||| || || Sbjct 4940 ACAGGCGAAGTCGCAATGGAGTCCCTCGTCCCTGCTAATCAGCTCATTTGAGAAGCACAA 4999 Query 13719 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAA 13778 || ||||||||||| | || || | ||| ||||| ||||| |||||||| |||||| Sbjct 5000 ACCAGGCATCAATCCCCTCTTCTTCATCCAGAATATGGCAGCAAATGATCCACTAAAGAA 5059 Query 13779 TATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTC----CAAACGATGCTTTTTTGT 13834 ||||||||||| ||||| || | | ||||| |||| ||| | | Sbjct 5060 AATTCCCTCAACACAGGCAAATGC----AACCATTCTCGTATCAAATGAT--TCAGCAGA 5113 Query 13835 TTGATATCCATTTTCTAGCCCATTCAGAttttttt----ttAATAAAATCCATTGTTTCG 13890 | | ||||| | | ||||| || | || ||| || | ||| |||| || Sbjct 5114 CTCA-ATCCACCTCATTGCCCAATCTGCCTTCTTTCGTATTGCTGGAAT--ATTG--TCA 5168 Query 13891 ATTGCATTGAATA--AA----TGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATA 13944 | |||||| |||| || |||||| | |||| | ||| ||| ||||| Sbjct 5169 ACTGCATTAAATAGGAAGTCTTGTTCCGT---TTTATCGC---AAACCAGTGTCTCAATC 5222 Query 13945 AGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACAT 14004 || ||| ||||| |||||||| ||||| || || || |||||||| || || || || Sbjct 5223 AGCTTGCTGTACATCTCAGAGTGGATGTTCTCAATTGCAATCTGAAACCCGTAGAAGCAC 5282 Query 14005 CTAGCTTCTGACCATTGT-ACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAAT 14063 | ||||| | || || || || | | || ||||| |||| ||| ||||| ||||| Sbjct 5283 TTGGCTTC-AAGCACAGTCACGTCGTTGGAGAACCTTTCGGCCAGGTTCTCATTTACAAT 5341 Query 14064 ACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTC 14114 ||||| || ||||| || || | | || || || ||||| || || Sbjct 5342 TCCATCTGAGGCAGCAAAGAAGGCAAGAACGTGCTTGATGAAGTACTGTTC 5392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478585587472680