Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterospora_20canceri_20[genbank_20GCA_5F002087915.1_202017-04-12] 537 sequences; 3,095,385 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq347 116 5e-21 >seq347 Length=13642 Score = 116 bits (128), Expect = 5e-21 Identities = 379/583 (65%), Gaps = 8/583 (1%) Strand=Plus/Plus Query 42064 ACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAG 42123 ||| ||||| ||||| || || ||||| || || ||||| | || || || || | Sbjct 4940 ACAGGCGAAGTCGCAATGGAGTCCCTCGTCCCTGCTAATCAGCTCATTTGAGAAGCACAA 4999 Query 42124 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAA 42183 || ||||| | || | ||| || | ||| ||||| | |||||||||||| |||||| Sbjct 5000 ACCAGGCATCAATCCCCTCTTCTTCATCCAGAATATGGCAGCAAATGATCCACTAAAGAA 5059 Query 42184 GATTCCTTCTACTGCCGCAAAGGCAATAAGTCTC-TCTCCA--TAACCGGCACTGTCATG 42240 ||||| || || ||||| |||| | |||| | || | | | ||| ||| Sbjct 5060 AATTCCCTCAACACAGGCAAATGCAACCATTCTCGTATCAAATGATTCAGCAGACTCA-- 5117 Query 42241 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 42300 |||||| | |||||||| ||||||||| || || || | || | ||||| Sbjct 5118 -ATCCACCTCATTGCCCAATCTGCCTTCTTTCGTATTGCTGGAATATTGTCAACTGCATT 5176 Query 42301 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACAT 42360 ||| || ||| || ||| | |||| ||| ||| || |||| || ||||| Sbjct 5177 AAATAGGAAGTCTTGTTCCGTTTTATCGCAAACCAGTGTCTCAATCAGCTTGCTGTACAT 5236 Query 42361 TTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAAC 42420 || || || ||||| ||||| || |||||||| |||||||| || |||| || || Sbjct 5237 CTCAGAGTGGATGTTCTCAATTGCAATCTGAAACCCGTAGAAGCACTTGGCTTCAAGCAC 5296 Query 42421 CTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGC 42480 || || | | || | ||| || | || || || || ||||| || ||| || Sbjct 5297 AGTCACGTCGTTGGAGAACCTTTCGGCCAGGTTCTCATTTACAATTCCATCTGAGGCAGC 5356 Query 42481 AAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTA-TTCCAAT 42539 ||| || || | || || || || || || | ||| | | |||| | || ||| Sbjct 5357 AAAGAAGGCAAGAACGTGCTTGATGAAGTACTGTTCAT-TTGCATTAAGGGAGTTGAAAT 5415 Query 42540 CATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTT 42599 | || ||| | || || || |||||||| ||||| || | | || ||| | Sbjct 5416 GCTGGAGATCAAATGTCATGTCGACCTCTTCTACGGTCCAGAAGGTGGACTCGTGCTTCT 5475 Query 42600 TATACATATTCCAGATATCATGATATTGAATTGGGAAAATAAC 42642 | || | | |||||| ||| |||| |||||||| || || || Sbjct 5476 TGTAGAACTCCCAGATCTCAGGATACTGAATTGGAAACATCAC 5518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671134694978120