Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterospora_20canceri_20[genbank_20GCA_5F002087915.1_202017-04-12] 537 sequences; 3,095,385 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq307 82.4 5e-11 >seq307 Length=79363 Score = 82.4 bits (90), Expect = 5e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 43904 AATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGC 43963 ||||| | ||||| || || |||||||| || ||||| ||||| ||| ||| | Sbjct 60865 AATCTCAGTACCAAGTGCAGTGTGCTCTCCTTCTGAATGTTATAGTCGCTTAGCGTCCTG 60924 Query 43964 TCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCT 44023 |||| || | || ||||| ||||| || | || |||||||| | || | ||||| Sbjct 60925 CCATCTTCAAGCTGCTTTCCAGCAAAGATGAGCCTCTGCTGGTCTGGTGGAATTCCTTCC 60984 Query 44024 TTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTA 44083 || || ||| ||| || || | | | || || || |||||| || | ||| Sbjct 60985 TTGTCCTGAATCTTTGCCTTTACGTTCTCGATCGTGTCACTCGACTCCACTTCCAGCGTG 61044 Query 44084 ATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 ||||| || || || | ||||||||||||| |||||| Sbjct 61045 ATTGTCTTTCCTGTCAGCGTCTTCACAAATACTTGCAT 61082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354775278091476