Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterospora_20canceri_20[genbank_20GCA_5F002087915.1_202017-04-12] 537 sequences; 3,095,385 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq307 138 3e-27 seq351 134 3e-26 seq347 89.7 1e-12 >seq307 Length=79363 Score = 138 bits (152), Expect = 3e-27 Identities = 145/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || |||||||| |||||||| ||| || || || ||||| || || ||||||||||| Sbjct 60892 TCCTTCTGAATGTTATAGTCGCTTAGCGTCCTGCCATCTTCAAGCTGCTTTCCAGCAAAG 60951 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || |||||||| || || || || |||||||| || |||||||||||||| ||||| || Sbjct 60952 ATGAGCCTCTGCTGGTCTGGTGGAATTCCTTCCTTGTCCTGAATCTTTGCCTTTACGTTC 61011 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | || || || | || || || || || || ||||| || || || || || ||| Sbjct 61012 TCGATCGTGTCACTCGACTCCACTTCCAGCGTGATTGTCTTTCCTGTCAGCGTCTTCACA 61071 Query 104549 AATATCTGCAT 104559 |||| ||||| Sbjct 61072 AATACTTGCAT 61082 >seq351 Length=13504 Score = 134 bits (148), Expect = 3e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || ||||| || || |||||| || || ||||||||||| || || || |||||||| Sbjct 4833 TCCTTCTGGATGTTGTAGTCACTCAGTGTCCTACCGTCTTCAAGCTGCTTGCCAGCAAAT 4774 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || |||||||| || || ||||| || || || || ||||| ||||| || || ||||| Sbjct 4773 ATCAGCCTCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGTATCTTCGCCTTCACATTC 4714 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | || || || | ||| ||||| ||||| || ||||| || || ||||| || || Sbjct 4713 TCAATCGTGTCACTCGATTCAACCTCAAGTGTGATTGTCTTTCCTGTGAGTGTCTTCACG 4654 Query 104549 AATATCTGCATT 104560 || | ||||||| Sbjct 4653 AACACCTGCATT 4642 >seq347 Length=13642 Score = 89.7 bits (98), Expect = 1e-12 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197 ||||| |||||| ||| || || || |||||| || || ||||| || || || ||| Sbjct 5086 GTTGCATTTGCCTGTGTTGAGGGAATTTTCTTTAGTGGATCATTTGCTGCCATATTCTGG 5027 Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGAC 269257 ||||||| || || | ||||| || || ||||| || || |||| ||||||||| Sbjct 5026 ATGAAGAAGAGGGGATTGATGCCTGGTTTGTGCTTCTCAAATGAGCTGATTAGCAGGGAC 4967 Query 269258 GAAGGTTTACACTGCGACTTCGCTTGT 269284 || || | || ||||||||||| ||| Sbjct 4966 GAGGGACTCCATTGCGACTTCGCCTGT 4940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151390478019196