Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterospora_20canceri_20[genbank_20GCA_5F002087915.1_202017-04-12] 537 sequences; 3,095,385 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq34 214 3e-51 seq496 210 3e-50 seq309 167 4e-37 seq243 98.7 2e-16 >seq34 Length=806 Score = 214 bits (236), Expect = 3e-51 Identities = 208/268 (78%), Gaps = 0/268 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||||||||| || | | | || ||||||||||| || |||||||| |||||||| Sbjct 699 CGCTAAGCGTCACCGAAAGGTTTTACGTGATAACATCCAGGGCATCACCAAACCAGCTAT 640 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||||||||||||| || || || |||||| ||||||| ||| |||||||||||| Sbjct 639 TCGTCGTCTGGCTCGTCGCGGCGGCGTGAAGCGTATCTCTGGCTTGATCTATGAAGAGAC 580 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| | ||| | ||||| ||| ||||||| |||||| || ||| || || Sbjct 579 ACGTGGTGTGCTTAAGGTGTTCCTGGAGAACGTTATCAGGGATGCTGTCACCTACACTGA 520 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||||||| ||||||||||| || ||||||| |||| ||||| |||| ||||| || Sbjct 519 GCACGCTAAGCGTAAGACTGTTACTGCCATGGACGTCGTGTATGCCCTGAAGCGTCAGGG 460 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 || | | || || ||||| ||||| Sbjct 459 ACGCACTCTGTACGGATTTGGTGGTTAA 432 >seq496 Length=5843 Score = 210 bits (232), Expect = 3e-50 Identities = 208/269 (77%), Gaps = 0/269 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||||||||| || | | | || ||||||||||| || |||||||| |||||||| Sbjct 5398 CGCTAAGCGTCACCGAAAGGTTTTACGTGATAACATCCAGGGCATCACCAAACCAGCTAT 5457 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||||||||||||| || || || |||||| ||||||| ||| |||||||||||| Sbjct 5458 TCGTCGTCTGGCTCGTCGCGGCGGCGTGAAGCGTATCTCTGGCTTGATCTATGAAGAGAC 5517 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| | ||| | ||||| ||| ||||||| |||||| || ||| || || Sbjct 5518 ACGTGGTGTGCTTAAGGTGTTCCTGGAGAACGTTATCAGGGATGCTGTCACCTACACTGA 5577 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||||||| || |||||||| || ||||||| |||| ||||| |||| ||||| || Sbjct 5578 GCACGCTAAGCGCAAGACTGTTACTGCCATGGACGTCGTGTATGCCCTGAAGCGTCAGGG 5637 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAAT 16700 || | | || || ||||| |||||| Sbjct 5638 ACGCACTCTGTACGGATTTGGTGGTTAAT 5666 >seq309 Length=1472 Score = 167 bits (184), Expect = 4e-37 Identities = 152/192 (79%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||||||||| || | | | || ||||||||||| || |||||||| |||||||| Sbjct 192 CGCTAAGCGTCACCGAAAGGTTTTACGTGATAACATCCAGGGCATCACCAAACCAGCTAT 133 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||||||||||||| || || || |||||| ||||||| ||| |||||||||||| Sbjct 132 TCGTCGTCTGGCTCGTCGCGGCGGCGTGAAGCGTATCTCTGGCTTGATCTATGAAGAGAC 73 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| | ||| | ||||| ||| ||||||| |||||| || ||| || || Sbjct 72 ACGTGGTGTGCTTAAGGTGTTCCTGGAGAACGTTATCAGGGATGCTGTCACCTACACTGA 13 Query 16612 GCACGCTAAACG 16623 ||||||||| || Sbjct 12 GCACGCTAAGCG 1 >seq243 Length=1874 Score = 98.7 bits (108), Expect = 2e-16 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||||||||| || | | | || ||||||||||| || |||||||| |||||||| Sbjct 1776 CGCTAAGCGTCACCGAAAGGTTTTACGTGATAACATCCAGGGCATCACCAAACCAGCTAT 1835 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||||||||||||||||| || || || |||||| |||| Sbjct 1836 TCGTCGTCTGGCTCGTCGCGGCGGCGTGAAGCGTATCTC 1874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074709017141