Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterospora_20canceri_20[genbank_20GCA_5F002087915.1_202017-04-12] 537 sequences; 3,095,385 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq216 131 1e-25 seq217 123 2e-23 seq2 91.5 1e-13 >seq216 Length=2226 Score = 131 bits (144), Expect = 1e-25 Identities = 75/77 (97%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 519 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGT 460 Query 20007 GGTAATATTTAGCCTTA 20023 ||| ||||||||||||| Sbjct 459 GGTCATATTTAGCCTTA 443 >seq217 Length=2224 Score = 123 bits (136), Expect = 2e-23 Identities = 83/93 (89%), Gaps = 5/93 (5%) Strand=Plus/Plus Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958 |||||||||| || |||||| ||||||||||||||||||||| || |||||||||| Sbjct 683 GCCCGTTCCCCTGCCTGTGGGTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 742 Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||| |||||||||||||||||||||||||||| Sbjct 743 ATCCATTCATGCGCGTCACTAATTAGATGACGA 775 >seq2 Length=62324 Score = 91.5 bits (100), Expect = 1e-13 Identities = 77/95 (81%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||| | ||||| | ||||| ||||| || |||||||| Sbjct 61468 AAGCCCGTTCCCTTGGCTGTTGGTTCGCAAAGCAGTAGGTAGGGACAGTGGGAATCTCGT 61409 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | ||| |||||||||||| ||||||||| ||||| Sbjct 61408 TGCTCCATTCATGCGCGTCGCTAATTAGACGACGA 61374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334945007875247