Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterospora_20canceri_20[genbank_20GCA_5F002087915.1_202017-04-12] 537 sequences; 3,095,385 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq347 140 4e-28 >seq347 Length=13642 Score = 140 bits (154), Expect = 4e-28 Identities = 404/616 (66%), Gaps = 8/616 (1%) Strand=Plus/Plus Query 32660 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 32719 ||| ||||| ||||| || || |||||||| || ||||| | || || || || | Sbjct 4940 ACAGGCGAAGTCGCAATGGAGTCCCTCGTCCCTGCTAATCAGCTCATTTGAGAAGCACAA 4999 Query 32720 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 32779 || ||||| | || | ||| || | ||| ||||||| |||||||||||| |||||| Sbjct 5000 ACCAGGCATCAATCCCCTCTTCTTCATCCAGAATATGGCAGCAAATGATCCACTAAAGAA 5059 Query 32780 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTC-TCTCCAT--AACCGGCGCTGTCATG 32836 |||||| || || ||||| |||| | |||| | || | | | || ||| Sbjct 5060 AATTCCCTCAACACAGGCAAATGCAACCATTCTCGTATCAAATGATTCAGCAGACTCA-- 5117 Query 32837 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 32896 |||||| | |||||||| ||||||||| || || || | || | ||||| Sbjct 5118 -ATCCACCTCATTGCCCAATCTGCCTTCTTTCGTATTGCTGGAATATTGTCAACTGCATT 5176 Query 32897 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACAT 32956 ||| || ||| || ||| | |||| ||| ||| ||||||| || ||||| Sbjct 5177 AAATAGGAAGTCTTGTTCCGTTTTATCGCAAACCAGTGTCTCAATCAGCTTGCTGTACAT 5236 Query 32957 TTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAAT 33016 || || || ||||| ||||| || || ||||| ||||||||||| | || || | Sbjct 5237 CTCAGAGTGGATGTTCTCAATTGCAATCTGAAACCCGTAGAAGCACTTGGCTTCAAGCA- 5295 Query 33017 CTGT-ACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTG 33075 | || || || | | || | ||| || | || ||||| || ||||| || ||| | Sbjct 5296 CAGTCACGTCGTTGGAGAACCTTTCGGCCAGGTTCTCATTTACAATTCCATCTGAGGCAG 5355 Query 33076 CAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAAT 33135 |||| || || | || || || || || || | ||| | || | || || ||| Sbjct 5356 CAAAGAAGGCAAGAACGTGCTTGATGAAGTACTGTTCATTTGCATTAAGGGAGTTGAAAT 5415 Query 33136 CATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTT 33195 | || ||| | || || || ||||| || ||||| || | | ||| ||| | Sbjct 5416 GCTGGAGATCAAATGTCATGTCGACCTCTTCTACGGTCCAGAAGGTGGACTCGTGCTTCT 5475 Query 33196 TATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTGGATTTT 33255 | || | | |||||| ||| |||| ||||||||||| || || | || ||| | | || Sbjct 5476 TGTAGAACTCCCAGATCTCAGGATACTGAATTGGAAACATCACGTACCTCTTTTGGTCTT 5535 Query 33256 TTGCAAGGATTGGTTC 33271 |||| | ||| || Sbjct 5536 CGTCAAGCAGTGGCTC 5551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633627746745200