Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterospora_20canceri_20[genbank_20GCA_5F002087915.1_202017-04-12] 537 sequences; 3,095,385 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq347 136 7e-27 >seq347 Length=13642 Score = 136 bits (150), Expect = 7e-27 Identities = 395/596 (66%), Gaps = 28/596 (5%) Strand=Plus/Minus Query 42396 AACGAAAAGTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTC 42455 || ||| ||| ||| |||| || | || |||||||| || ||||| || || || || Sbjct 5395 AATGAACAGTACTTCATCAAGCACGTTCTTGCCTTCTTTGCTGCCTCAGATGGAATTGTA 5336 Query 42456 AATGAGAACCTGGCCACCAGGTTCATGAAAGAGGTG-CAGTACTTTGAGGCGCGCTGCTT 42514 ||||||||||||||| |||||| || || ||| | || | |||| || ||||| Sbjct 5335 AATGAGAACCTGGCCGAAAGGTTCTCCAACGACGTGACTGTGC-TTGAAGCCAAGTGCTT 5277 Query 42515 CTACGGCTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAA 42574 |||||| || ||||| || || |||||| | ||||||||| ||||| ||| ||| | | Sbjct 5276 CTACGGGTTTCAGATTGCAATTGAGAACATCCACTCTGAGATGTACAGCAAGCTGATTGA 5217 Query 42575 CACGTACATCCTGGATCCCG-TCGAGCGTAACGGG-----CTGTTCAAGGCCATGGAGAC 42628 || |||| | || | | || ||| | || || || || | || | Sbjct 5216 GAC------ACTGGTTTGCGATAAAACGGAACAAGACTTCCTATTTAATGCAGTTGACAA 5163 Query 42629 GATGCCCTGCATCAAG-AAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACG 42687 || || ||| | | |||||||| || ||||| | | ||||| ||| | | || Sbjct 5162 TAT-TCCAGCAATACGAAAGAAGGCAGATTGGGCAATGAGGTGGATTGAGTCTGCTGA-- 5106 Query 42688 CAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCG 42747 | | || | ||| |||| || ||| || || ||||| || ||||| || Sbjct 5105 -ATCATTTGATACGAGAATGGTTGCATTTGCCTGTGTTGAGGGAATTTTCTTTAGTGGAT 5047 Query 42748 CCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGA 42807 | || || |||| |||||| | ||| ||| || | |||||| || | |||||| | Sbjct 5046 CATTTGCTGCCATATTCTGGATGAAGAAGAGGGGATTGATGCCTGGTTTGTGCTTCTCAA 4987 Query 42808 ACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGA 42867 | || || || |||||||||||||| || ||| | ||||| ||||| |||| ||| | | Sbjct 4986 ATGAGCTGATTAGCAGGGACGAGGGACTCCATTGCGACTTCGCCTGTCTCC--TTCAC-A 4930 Query 42868 GCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGG 42927 || ||| | ||| | ||| | | || | ||| | | |||||||| | Sbjct 4929 AATACATCAACAAAAAGTGCAAGAA-CATC-ACTCAG----ATCGTGAAAGAGGCCGTTG 4876 Query 42928 AGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAAC 42983 ||||||||||||||| || || |||| |||| || |||| | || |||||| Sbjct 4875 TGATCGAGAAGGAGTTTCTGACTGAGTCATTGCCAGTTGACCTGATTGGGATGAAC 4820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944332861123120