Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterospora_20canceri_20[genbank_20GCA_5F002087915.1_202017-04-12] 537 sequences; 3,095,385 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq347 141 1e-28 >seq347 Length=13642 Score = 141 bits (156), Expect = 1e-28 Identities = 403/610 (66%), Gaps = 11/610 (2%) Strand=Plus/Plus Query 18960 ACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAA 19019 ||| || || || ||||| ||||||||||| || || |||| ||||| || || || Sbjct 4940 ACAGGCGAAGTCGCAATGGAGTCCCTCGTCCCTGCTAATCAGCTCATTTGAGAAGCACAA 4999 Query 19020 ACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAA 19079 ||||||||||| ||| || || || | ||||||||| | ||||||||||||| |||||| Sbjct 5000 ACCAGGCATCAATCCCCTCTTCTTCATCCAGAATATGGCAGCAAATGATCCACTAAAGAA 5059 Query 19080 TATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTC-CATAACTAGCATCATTATTAT 19138 || || || || ||||| ||||| | ||||| || | | ||| | | Sbjct 5060 AATTCCCTCAACACAGGCAAATGCAAC----CATTCTCGTATCAAATGATTCAGCAGACT 5115 Query 19139 GAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAAT 19198 |||||| ||| ||||||||| ||||||||| || ||| || | || | | || Sbjct 5116 CAATCCACCTCATTGCCCAATCTGCCTTCTTTCGTATTGCTGGAATATTGTCAACTGCAT 5175 Query 19199 TAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACA 19258 ||||||| | | || | |||| ||| || || |||| ||||||| Sbjct 5176 TAAATAGGAAGTCTTGTTCCGTTTTATCGCAAACCAGTGTCTCAATCAGCTTGCTGTACA 5235 Query 19259 TTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTA 19318 | || || || || || || || || |||||||| ||||| || || | ||||| | Sbjct 5236 TCTCAGAGTGGATGTTCTCAATTGCAATCTGAAACCCGTAGAAGCACTTGGCTTCAAGCA 5295 Query 19319 TCTGT-ACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCT 19377 | || || || | | || |||||| ||| || ||||| || |||||||| || Sbjct 5296 -CAGTCACGTCGTTGGAGAACCTTTCGGCCAGGTTCTCATTTACAATTCCATCTGAGGCA 5354 Query 19378 GCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGTA-TTCCA 19436 ||||| || || | || || || || || | | ||||| || |||| | | || | Sbjct 5355 GCAAAGAAGGCAAGAACGTGCTTGATGAAGTACTGTTCATTTG-CATTAAGGGAGTTGAA 5413 Query 19437 ATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTC-TGCTT 19495 || | | ||| | | || || ||||| || ||||| || | | ||| ||| | Sbjct 5414 ATGCTGGAGATCAAATGTCATGTCGACCTCTTCTACGGTCCAGAAGGTGGACTCGTGC-T 5472 Query 19496 TTTTATACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTAT 19555 | || || | | ||| || ||| |||| || || ||||| || || | || |||| | Sbjct 5473 TCTTGTAGAACTCCCAGATCTCAGGATACTGAATTGGAAACATCACGTACCTCTTTTGGT 5532 Query 19556 TTTCTTTAAG 19565 ||| | ||| Sbjct 5533 CTTCGTCAAG 5542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562105026844680