Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterospora_20canceri_20[genbank_20GCA_5F002087915.1_202017-04-12] 537 sequences; 3,095,385 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq60 114 2e-20 seq347 113 5e-20 >seq60 Length=38135 Score = 114 bits (126), Expect = 2e-20 Identities = 136/181 (75%), Gaps = 4/181 (2%) Strand=Plus/Minus Query 75899 CAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAAC 75958 |||| ||||| ||||| || || ||| | |||||||| | ||||||| ||| ||||| Sbjct 3178 CAGATTGAGACAGGAACTCCCTACATGGTCTACAAGGACTCCTGTAACAGGAATTGTAAC 3119 Query 75959 CAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACA 76018 || || || |||||||||| |||| || ||| | || | ||||| | ||||| ||| Sbjct 3118 CAGAATAACATGGGAACAATTAAGACATCTAATTTATGTGCAGAAATAGTGGAGTATACA 3059 Query 76019 GA-TAAG-GATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCA 76076 || | || ||| | | ||||| ||||||||||| |||||| ||| ||||| || |||| Sbjct 3058 GACTCAGAGATAA--CTGCTGTATGCAATTTGGCTTCAATCTGCCTACCAAAATACGTCA 3001 Query 76077 A 76077 | Sbjct 3000 A 3000 >seq347 Length=13642 Score = 113 bits (124), Expect = 5e-20 Identities = 285/422 (68%), Gaps = 10/422 (2%) Strand=Plus/Minus Query 65087 TTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC-GCTATTTATTGG 65145 |||| ||||| ||||| ||||| || ||||| || ||||| ||| || || | ||| Sbjct 5085 TTGCATTTGCCTGTGTTGAGGGAATTTTCTTTAGTGGATCATT-TGCTGCCATATTCTGG 5027 Query 65146 TTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGAT 65205 |||||||| |||| | ||||| || | |||||||||||||| || ||| | | || Sbjct 5026 ATGAAGAAGAGGGGATTGATGCCTGGTTTGTGCTTCTCAAATGAGCTGATTAGCAGGGAC 4967 Query 65206 GAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTTTGCGTAATAGACCCACT 65265 ||||| ||||| || || ||| || | ||||| | | | | | | | | | Sbjct 4966 GAGGGACTCCATTGCGACTTCGCC-TGTCTC-CTTCACAAATA--CATCA-ACAAAAAGT 4912 Query 65266 ACCGAAACTATCCACGCC-ATCGTGAAAGAGGCGGTTGAGATTGAGAAAGGGTTCATCTT 65324 | ||| ||| || | |||||||||||||| |||| ||| ||||| | ||| | Sbjct 4911 GCAAGAAC-ATC-ACTCAGATCGTGAAAGAGGCCGTTGTGATCGAGAAGGAGTTTCTGAC 4854 Query 65325 GGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGAGTACATTGA 65384 || || | ||| | | || || || |||||||| || |||| | | || ||||| Sbjct 4853 TGAGTCATTGCCAGTTGACCTGATTGGGATGAACTCGAAGTTGATGAGCCAATATATTGA 4794 Query 65385 GTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCCACCCATTTGGAACGCGAAGAA 65444 || ||| | || | || ||| | | | |||| | || | | || || |||| Sbjct 4793 GTTTGTAGCAGACAGGCTGCTCTACGCATTGGGGGAGTCAAAGGTGTTCAATGCTGAGAA 4734 Query 65445 TCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTCTTTGAGAAGCG 65504 ||||||||| || ||||| ||| | || || | || ||||| |||||||| || ||||| Sbjct 4733 TCCATTTGATTTCATGGACAACCTGAGTCTCCAGGGAAAGACGAACTTCTTCGATAAGCG 4674 Query 65505 AG 65506 || Sbjct 4673 AG 4672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596565595526560