Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterospora_20canceri_20[genbank_20GCA_5F002087915.1_202017-04-12] 537 sequences; 3,095,385 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq178 120 4e-21 seq330 114 2e-19 seq493 107 2e-17 seq21 91.5 2e-12 >seq178 Length=3076 Score = 120 bits (132), Expect = 4e-21 Identities = 147/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 |||||||| ||| | | | || || ||||| ||||||||||| | || ||| ||| Sbjct 1446 GCCAGTTCACCGGGAAGCAAGAGACGAACGGCAGTCTGGATCTCCCTGCTGGTGATAGTG 1387 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 |||||||| |||| |||| ||| || |||| | ||||||| || | |||||| Sbjct 1386 GAACGCTTGTTGTAGTGTGCCAAACGAGAAGCTTCGGCGGCGATGCGTTCAAAGATGTCG 1327 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527 || || || || ||||||| ||||| | |||| || | ||| ||| ||||| ||| Sbjct 1326 TTCACGAAAGAATTCATGATAGACATAGCCTTGGAAGACACGCCGGTGTCAGGGTGAACC 1267 Query 1254528 TGCTTGAGCACCTTGTAGATG 1254548 ||||| ||||||||||||||| Sbjct 1266 TGCTTCAGCACCTTGTAGATG 1246 >seq330 Length=1390 Score = 114 bits (126), Expect = 2e-19 Identities = 146/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 |||||||| ||| | | | || || ||||| ||||||||||| | || ||| ||| Sbjct 1065 GCCAGTTCACCGGGAAGCAAGAGACGAACGGCAGTCTGGATCTCCCTGCTGGTGATAGTG 1124 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 |||||||| |||| |||| ||| || |||| | ||||||| || | || ||| Sbjct 1125 GAACGCTTGTTGTAGTGTGCCAAACGAGAAGCTTCGGCGGCGATGCGTTCAAAGATATCG 1184 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527 || || || || ||||||| ||||| | |||| || | ||| ||| ||||| ||| Sbjct 1185 TTCACGAAAGAATTCATGATAGACATGGCCTTGGAAGACACGCCGGTGTCAGGGTGAACC 1244 Query 1254528 TGCTTGAGCACCTTGTAGATG 1254548 ||||| ||||||||||||||| Sbjct 1245 TGCTTCAGCACCTTGTAGATG 1265 >seq493 Length=896 Score = 107 bits (118), Expect = 2e-17 Identities = 128/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 1254375 ACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGCGCCAGACGG 1254434 ||||| ||||||||||| | || ||| ||| |||||||| |||| |||| ||| Sbjct 1 ACGGCAGTCTGGATCTCCCTGCTGGTGATAGTGGAACGCTTGTTGTAGTGTGCCAAACGA 60 Query 1254435 CCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATC 1254494 || |||| | ||||||| || | || ||||| || || || ||||||| ||||| Sbjct 61 GAAGCTTCGGCGGCGATGCGTTCAAAGATATCGTTCACGAAAGAATTCATGATAGACATG 120 Query 1254495 GACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||| || | ||| ||| ||||| |||||||| ||||||||||||||| Sbjct 121 GCCTTGGAAGACACGCCGGTGTCAGGGTGAACCTGCTTCAGCACCTTGTAGATG 174 >seq21 Length=823 Score = 91.5 bits (100), Expect = 2e-12 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 1254411 CGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTG 1254470 |||||||| |||| |||| ||| || |||| | ||||||| || | || ||||| Sbjct 7 CGCTTGTTGTAGTGTGCCAAACGAGAAGCTTCGGCGGCGATGCGTTCAAAGATATCGTTC 66 Query 1254471 ACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGC 1254530 || || || ||||||| ||||| | |||| || | ||| ||| ||||| |||||| Sbjct 67 ACGAAAGAATTCATGATAGACATGGCCTTGGAAGACACGCCGGTGTCAGGGTGAACCTGC 126 Query 1254531 TTGAGCACCTTGTAGATG 1254548 || ||||||||||||||| Sbjct 127 TTCAGCACCTTGTAGATG 144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107095131265229