Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterospora_20canceri_20[genbank_20GCA_5F002087915.1_202017-04-12] 537 sequences; 3,095,385 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq1 86.0 1e-11 seq347 84.2 5e-11 >seq1 Length=133369 Score = 86.0 bits (94), Expect = 1e-11 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 280223 ATTGAACCAACATATTATGCTCCAATTATCCCTATGATTCTTGTTAATGGTGCTCAAGGA 280282 |||||||| ||||| || ||||| || || ||| ||||||| ||||| ||| | ||| Sbjct 47721 ATTGAACCTGTTTATTACGCGCCAATCATTCCAATGGTTCTTGTAAATGGAGCTGATGGA 47780 Query 280283 ATTGGAACAGGTTATTCTACATCTATCCCAATGTACAATCCAATTGATAT 280332 ||||||||||| | | ||||| || |||| ||||| |||||||| || Sbjct 47781 ATTGGAACAGGATGGGCCACATCAATTCCAAATTACAACCCAATTGAAAT 47830 >seq347 Length=13642 Score = 84.2 bits (92), Expect = 5e-11 Identities = 132/187 (71%), Gaps = 9/187 (5%) Strand=Plus/Minus Query 131766 TATTTGATGCTGTAAATAAATTTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAAT 131825 ||||| |||| || | || |||| ||||| |||||| ||||| ||||| || | | Sbjct 5181 TATTTAATGCAGTTGACAATATTCCAGCAATACGAAAGAAGGCAGATTGGGCAATGAGGT 5122 Query 131826 GGATTCAAGATGATTCCGCT-AAT--TTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTG 131882 ||||| || || ||| ||| ||| ||| ||| | || || ||||| ||||||| Sbjct 5121 GGATT------GAGTCTGCTGAATCATTTGATACGAGAATGGTTGCATTTGCCTGTGTTG 5068 Query 131883 AAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGA 131942 | || || |||||| || | || ||| || || ||| | |||||| | ||||||| Sbjct 5067 AGGGAATTTTCTTTAGTGGATCATTTGCTGCCATATTCTGGATGAAGAAGAGGGGATTGA 5008 Query 131943 TGCCTGG 131949 ||||||| Sbjct 5007 TGCCTGG 5001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186804634357057