Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterospora_20canceri_20[genbank_20GCA_5F002087915.1_202017-04-12] 537 sequences; 3,095,385 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq347 141 1e-28 >seq347 Length=13642 Score = 141 bits (156), Expect = 1e-28 Identities = 527/820 (64%), Gaps = 22/820 (3%) Strand=Plus/Plus Query 39383 TTTTCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAA 39442 || |||||||||||||| ||||| ||||| | ||| || ||| | | Sbjct 4713 TTGTCCATGAAATCAAATGGATTCTCAGCATTGAACACCTTTGACTCCCCCAATGCGTAG 4772 Query 39443 ATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATG 39502 | || || ||||| ||||| || || ||| |||||| | | ||||| || || Sbjct 4773 AGCAGCCTGTCTGCTACAAACTCAATATATTGGCTCATCAACTTCGAGTTCATCCCAATC 4832 Query 39503 AGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATT 39562 || | |||||| | | ||| || |||||||| || ||||| | ||||||||| | | Sbjct 4833 AGGTCAACTGGCAATGACTCAGTCAGAAACTCCTTCTCGATCACAACGGCCTCTTTCACG 4892 Query 39563 ATC-----GATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGC 39617 ||| |||||| || | | | | || |||| | | | | || | | Sbjct 4893 ATCTGAGTGATGTT-CTTGCACTT---TTTGTTGATGTATT-----TGTGAAGGAGA--C 4941 Query 39618 AGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTC 39677 |||||||||| ||||| || ||||| || || ||||| | || || || || | | Sbjct 4942 AGGCGAAGTCGCAATGGAGTCCCTCGTCCCTGCTAATCAGCTCATTTGAGAAGCACAAAC 5001 Query 39678 CAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGA 39737 ||||||| | || | ||| || | ||| |||||||||||||| |||||| |||||| | Sbjct 5002 CAGGCATCAATCCCCTCTTCTTCATCCAGAATATGGCAGCAAATGATCCACTAAAGAAAA 5061 Query 39738 TGCCTTCTACTGCTGCAAATGCAACAAGTCTC-TCTCCGTAACT--TGTATCATTATGTA 39794 | || || || ||||||||||| | |||| | || || | | | || | | Sbjct 5062 TTCCCTCAACACAGGCAAATGCAACCATTCTCGTATC---AAATGATTCAGCAGACTCAA 5118 Query 39795 TCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAA 39854 ||||| || ||||||||| || ||||| || || || | || | ||||||| Sbjct 5119 TCCACCTCATTGCCCAATCTGCCTTCTTTCGTATTGCTGGAATATTGTCAACTGCATTAA 5178 Query 39855 AGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTT 39914 | || | | || ||| |||| ||| ||| || || | | || ||||| | Sbjct 5179 ATAGGAAGTCTTGTTCCGTTTTATCGCAAACCAGTGTCTCAATCAGCTTGCTGTACATCT 5238 Query 39915 CTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTT 39974 | || |||||||| ||||| || |||||||| ||||| || || | |||||| | Sbjct 5239 CAGAGTGGATGTTCTCAATTGCAATCTGAAACCCGTAGAAGCACTTGGCTTCAAGCACAG 5298 Query 39975 GTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAA 40034 || || | || ||||| |||| || ||||| || |||||||| || |||| Sbjct 5299 TCACGTCGTTGGAGAACCTTTCGGCCAGGTTCTCATTTACAATTCCATCTGAGGCAGCAA 5358 Query 40035 AAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCAT 40094 | || || | || || || || || || | ||||| | | | || | | | Sbjct 5359 AGAAGGCAAGAACGTGCTTGATGAAGTACTGTTCATTTGCATTAAGGGAGTTGAAATGCT 5418 Query 40095 TGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGT 40154 || ||| || || || || ||||| | ||||| || | | ||| ||| |||| Sbjct 5419 GGAGATCAAATGTCATGTCGACCTCTTCTACGGTCCAGAAGGTGGACTCGTGCTTCTTGT 5478 Query 40155 ACATGTTCCATATATCACGATATTGTATTGGAAAAATAAC 40194 | | | ||| || ||| |||| || |||||||| || || Sbjct 5479 AGAACTCCCAGATCTCAGGATACTGAATTGGAAACATCAC 5518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686904189124680