Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterospora_20canceri_20[genbank_20GCA_5F002087915.1_202017-04-12] 537 sequences; 3,095,385 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq347 89.7 4e-13 >seq347 Length=13642 Score = 89.7 bits (98), Expect = 4e-13 Identities = 231/349 (66%), Gaps = 16/349 (5%) Strand=Plus/Minus Query 43940 TGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTG 43999 || || || |||||||| ||||| || || || || || || || |||||||| ||| Sbjct 5281 TGCTTCTACGGGTTTCAGATTGCAATTGAGAACATCCACTCTGAGATGTACAGCAAGCTG 5222 Query 44000 ATAGATAC----GTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGA 44055 || || || || | | | || || ||| | || | |||||||| | || Sbjct 5221 ATTGAGACACTGGTTTGCGATAAAACGGAACAAGA--CTTCC--TATTTAATGCAGTTGA 5166 Query 44056 AACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGA 44115 | | || || || | | || ||||| ||||| | | ||||| | || ||| Sbjct 5165 CAATATTCCAGCAATACGAAAGAAGGCAGATTGGGCAATGAGGTGGATTGAGTCTGCTGA 5106 Query 44116 TTCTTTTG----GAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAG 44171 || |||| ||||| | || || ||||| ||| || || ||||||||| | Sbjct 5105 ATCATTTGATACGAGAATG----GTTGCATTTGCCTGTGTTGAGGGAATTTTCTTTAGTG 5050 Query 44172 GATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTT 44231 |||| ||||| |||||||| ||| | ||||| | || ||||||||||| ||| || | Sbjct 5049 GATCATTTGCTGCCATATTCTGGATGAAGAAGAGGGGATTGATGCCTGGTTTGTGCTTCT 4990 Query 44232 CAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTG 44280 |||||||| | || || | || || || | |||||||| || || || Sbjct 4989 CAAATGAGCTGATTAGCAGGGACGAGGGACTCCATTGCGACTTCGCCTG 4941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397453398774685