Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterospora_20canceri_20[genbank_20GCA_5F002087915.1_202017-04-12] 537 sequences; 3,095,385 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq60 127 3e-24 seq347 118 1e-21 >seq60 Length=38135 Score = 127 bits (140), Expect = 3e-24 Identities = 139/181 (77%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 111218 TTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATC-CTTA-T 111275 ||||| || ||||| ||| |||||| ||||||||||| ||||| | | ||| || | | Sbjct 3000 TTGACGTATTTTGGTAGGCAGATTGAAGCCAAATTGCATACAGCAG--TTATCTCTGAGT 3057 Query 111276 CTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTT 111335 |||| ||||| | ||||||| |||||| || || ||||||| || |||| || || | Sbjct 3058 CTGTATACTCCACTATTTCTGCACATAAATTAGATGTCTTAATTGTTCCCATGTTATTCT 3117 Query 111336 GGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCT 111395 |||||| ||| |||| || | |||||||||| ||||||||| || || ||||| ||| Sbjct 3118 GGTTACAATTCCTGTTACAGGAGTCCTTGTAGACCATGTAGGGAGTTCCTGTCTCAATCT 3177 Query 111396 G 111396 | Sbjct 3178 G 3178 >seq347 Length=13642 Score = 118 bits (130), Expect = 1e-21 Identities = 285/420 (68%), Gaps = 10/420 (2%) Strand=Plus/Plus Query 122383 CGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATAAAGTCAAATGGA 122442 ||||| || |||||||| ||||| || | || || | ||| ||||| || ||||||||| Sbjct 4674 CGCTTATCGAAGAAGTTCGTCTTTCCCTGGAGACTCAGGTTGTCCATGAAATCAAATGGA 4733 Query 122443 TTCTTCGCGTTCCAAATGGGTGGCACCCCAACTTGTTTGAGGAGACGATCCGACACATAC 122502 |||| || || | | || | |||| | | | ||| || | || | ||| || Sbjct 4734 TTCTCAGCATTGAACACCTTTGACTCCCCCAATGCGTAGAGCAGCCTGTCTGCTACAAAC 4793 Query 122503 TCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGTTACATGGGAGTGCGTCC 122562 ||||| || | | |||| || |||||||| || || |||| | ||| | || || Sbjct 4794 TCAATATATTGGCTCATCAACTTCGAGTTCATCCCAATCAGGTCAACTGGCAATGACTCA 4853 Query 122563 AAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGAT-GGCGTGGATAGTTTCGGT 122621 | ||| | ||||| ||| |||| |||||||||||||| | || ||| ||| | Sbjct 4854 GTCAGAAACTCCTTCTCGATCACAACGGCCTCTTTCACGATCTGAGT-GAT-GTTCTTGC 4911 Query 122622 AGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAACTCCTGGTGGAGACCCTC 122681 | | | | | | | | | ||||| | || ||| || || ||||| ||||| Sbjct 4912 ACTTTTTGT-TGATG--TATTTGTGAAG-GAGACA-GGCGAAGTCGCAATGGAGTCCCTC 4966 Query 122682 ATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTCTTCAA 122741 || | | ||| || |||||||||||||| | ||| ||||| | |||| |||||||| Sbjct 4967 GTCCCTGCTAATCAGCTCATTTGAGAAGCACAAACCAGGCATCAATCCCCTCTTCTTCAT 5026 Query 122742 CCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAACGCAA 122800 ||| | || || ||| ||||| || ||||| || ||||| ||||| ||||| |||| Sbjct 5027 CCAGAATATGGCAGCA-AATGATCCACTAAAGAAAATTCCCTCAACACAGGCAAATGCAA 5085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628027784335200