Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterospora_20canceri_20[genbank_20GCA_5F002087915.1_202017-04-12] 537 sequences; 3,095,385 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq254 91.5 2e-13 seq1 82.4 9e-11 >seq254 Length=77609 Score = 91.5 bits (100), Expect = 2e-13 Identities = 280/421 (67%), Gaps = 14/421 (3%) Strand=Plus/Minus Query 117840 AGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAG--GACA 117897 ||||||||||| || || ||||| || | |||||| | || | ||||||||| || Sbjct 34011 AGGTAGTACATTCCTGTTTTGAGGCCAAGTTTCCAGCCGTAGAAGTGCATTGAGCTGAGT 33952 Query 117898 ACTTGGAGAGGGTTGGA--CTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAA 117955 | | | || |||| |||| | |||||| |||| || | ||||| | ||| Sbjct 33951 ATTCCGTAAG--TTGGCTGCTTTAC--GAAGAGATTCAATGACTGTGTCTGATCAAGGAA 33896 Query 117956 -GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTCC 118014 || | | | || | ||||| || | ||| |||||| ||||| ||||| || ||| Sbjct 33895 CGCCTGTCTG-TCATCAGCCATTTCCAGAACACGCTTCATTTTGATCTCCCAAACTGTCT 33837 Query 118015 TGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCT 118074 ||||||| | || || | ||| || || | || |||||||||||| | || Sbjct 33836 TGTAGAGCTGTTTGATTTGATCAGGAATCACAGGAATCGACTGGATGGATCCATCGTACT 33777 Query 118075 TGACCATGAGATCCTTCATATCCTTTGACCAGAGACC-AATCTTTTTGAGATCCTCCACG 118133 || || || | | |||| || || ||||| || || |||| | ||||| |||| Sbjct 33776 CGATAATCAGCTGCCTCATCTCATTCGACCACAGTCCCAATCGAATC-AGATCATCCATC 33718 Query 118134 AGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTC 118193 ||| ||| || || || ||||| || | || ||||| |||| || | | Sbjct 33717 AGAAATCGATTCACGACCTGGAAATCACCTGCAAATGTTCGTCTTGTGAAGATGTTCGAC 33658 Query 118194 GTGTAT-GGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCAT 118252 || || ||||| | |||||| |||| || |||||||||| |||| ||||||||||| Sbjct 33657 -TGAATTGGCTCCATGCACTCGCTGTTTCCACAGATTTGGGCAGTGGTTGCTGTGGGCAT 33599 Query 118253 G 118253 | Sbjct 33598 G 33598 >seq1 Length=133369 Score = 82.4 bits (90), Expect = 9e-11 Identities = 140/200 (70%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 179956 TTCCCACGGAGAGGGAACACACCGTAGTGATCACGACCAACCACAGAGAGACCAGCAACT 180015 || || | ||| || ||||| ||||| | ||||| || || | ||||||||||||| Sbjct 46717 TTACCCCTGAGTGGAAACACCCCGTAATTGTCACGGCCTACGATGCTGAGACCAGCAACT 46658 Query 180016 GCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCGTACACTTTCCAG-ATTGTGC 180074 ||||| ||||| |||||||| || ||||||| || | ||| || || | | | | | Sbjct 46657 GCGAGTGTCTTAGCGGAATCTCCTTCCGTCAGAATCAACGTGCA---TCGGGAACTCTTC 46601 Query 180075 --CGTCCCTGCCTTGTTCGCGTCGTCCAACTTGGGAATACCAGTAATTTTGGACTTACGA 180132 || || || |||||||| || |||| || || || |||| | ||||| | | Sbjct 46600 TTTGTTCCAGCATTGTTCGCATCCTCCAGTTTTGGTATCCCAGACAGTTTGGTCGTTTTT 46541 Query 180133 GCGCCATCTGTCTTCTTGAG 180152 | ||||| ||||| ||||| Sbjct 46540 GTTCCATCCGTCTTTTTGAG 46521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618431048753720