Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterospora_20canceri_20[genbank_20GCA_5F002087915.1_202017-04-12] 537 sequences; 3,095,385 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq254 91.5 2e-13 seq347 87.8 2e-12 >seq254 Length=77609 Score = 91.5 bits (100), Expect = 2e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 104909 CAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAAT 104968 |||| ||||||||||| || |||||||| |||||||||||||||||| ||| || || Sbjct 32963 CAAATTGAGACTGGTACGCCCTACATGCTGTACAAAGACGCCTGTAACAGAAACAGCAAC 33022 Query 104969 CAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACA 105028 || || || | || ||||| | |||||||||||| || ||| | |||| || Sbjct 33023 CAGAACAACCTTGGAACCATCAAATGCTCCAATCTCTGTGGTGAGATCCTTGAATACTCA 33082 Query 105029 GACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAAT 105066 || | |||||||| |||||||| ||||| || Sbjct 33083 GATAGCAGCACCACGGCTGTCTGTAACCTGGCATCGAT 33120 >seq347 Length=13642 Score = 87.8 bits (96), Expect = 2e-12 Identities = 322/491 (66%), Gaps = 29/491 (6%) Strand=Plus/Minus Query 94749 AAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGT---TCCTTTGCTGA 94805 |||||| || |||||||| |||| |||| |||| ||| | || |||| | Sbjct 5147 AAAGAAGGCAGATTGGGCAATGAGGTGGATTGA------GTCTGCTGAATCATTTGATAC 5094 Query 94806 GCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTA 94864 | || | | |||||||| ||||||||||| || ||||| ||| || || ||| || | Sbjct 5093 GAGAATGGTTGCATTTGCCTGTGTTGAGGGAATTTTCTTTAGTGGATCATT-TGCTGCCA 5035 Query 94865 TTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCT 94924 | | ||| | |||||| | || | ||||| ||| | |||||||| || ||||| || Sbjct 5034 TATTCTGGATGAAGAAGAGGGGATTGATGCCTGGTTTGTGCTTCTCAAATGAGCTGATTA 4975 Query 94925 CTCGTGACGAGGGACTCCACCAAGAGTTTGCGGTGGAACTTTTCAAATTATTGCGTATTA 94984 | |||||||||||||| || || || ||| ||||| || | Sbjct 4974 GCAGGGACGAGGGACTCCATTGCGACTTCGCCTGTCTCCTTCACAAAT------ACATCA 4921 Query 94985 AACCAACGACTG--AGACTATTCATTC-TATTGTTAAGGAAGCCGTTGAGATTGAGAAAG 95041 | ||| | || ||| | ||| || || || || || ||||||| ||| ||||| | Sbjct 4920 A--CAAAAAGTGCAAGAACA-TCACTCAGATCGTGAAAGAGGCCGTTGTGATCGAGAAGG 4864 Query 95042 -GATTCATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGAATTCTGAAAAAATGTCT 95100 | ||| | | || | | ||| | || || || ||||| || | ||| Sbjct 4863 AGTTTCTGACT-GAGTCATTGCCAGTTGACCTGATTGGGATGAACTCGAAGTTGATGAGC 4805 Query 95101 GAATATATTGAGTATGTATCTGATAGATTGTTGAAGCAGATCGGGGTGCCTCCAA--TTT 95158 |||||||||||| |||| | || || || | | | || |||| | || || | | Sbjct 4804 CAATATATTGAGTTTGTAGCAGACAGGCTGCTCTA-CGCATTGGGG-GAGTCAAAGGTGT 4747 Query 95159 GGAACTCCAAGAATCCATTTGACTTCATGGAGAACATTAGCCTCGACGGGAAGACAAACT 95218 || | ||||||||||||| |||||||| ||| | || ||| | || ||||| |||| Sbjct 4746 TCAATGCTGAGAATCCATTTGATTTCATGGACAACCTGAGTCTCCAGGGAAAGACGAACT 4687 Query 95219 TCTTCGAAAAG 95229 ||||||| ||| Sbjct 4686 TCTTCGATAAG 4676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583256884861880