Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterospora_20canceri_20[genbank_20GCA_5F002087915.1_202017-04-12] 537 sequences; 3,095,385 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq1 86.0 7e-12 >seq1 Length=133369 Score = 86.0 bits (94), Expect = 7e-12 Identities = 200/298 (67%), Gaps = 8/298 (3%) Strand=Plus/Minus Query 152769 GTTGAGGACCAAGCCCTTGATGTGCGATCCGTCAAGATCCGCGTCGGTCATGATCATCAG 152828 ||||| || | |||||||||||| ||||| |||| |||| || ||||| |||||||| Sbjct 46907 GTTGATGATGAGGCCCTTGATGTGTGATCCATCAAAATCCTGATCAGTCATTATCATCAG 46848 Query 152829 ACGACCGTAGCGCAG---GTCACGTAGTGACCC-GTAGACCTTTCCATGTTGAAGCCCGA 152884 || || ||||| ||| || || | | ||| |||||| || || | || | Sbjct 46847 CTTTCCATATCGCAGACTGTC---TA-TGTCACTGTACGTCTTTCCGTGCTGCAATCCCA 46792 Query 152885 GGATCTTTTTGAGGTTGGAAAATTCCTCATTATCGGTCACCTGTTTCACCGTGGCATCCC 152944 | ||||| || | | | ||| |||| || | | ||||| ||||| || | Sbjct 46791 GTATCTTCTTCAATGCGCTTATTTCTGCATTCTCCATAATTTGTTTGTTTGTGGCTTCAC 46732 Query 152945 GAACATTGCGCGGCTTTCCCCGGAGTGGAAACACGCCGAACGCGTTGCGGCCTACAACGC 153004 | ||||| || || |||| |||||||||||| ||| | || |||||||| | || Sbjct 46731 GCACATTAAGCAATTTACCCCTGAGTGGAAACACCCCGTAATTGTCACGGCCTACGATGC 46672 Query 153005 TCAGACCGGCAATAGCAAGGGCTTTCGCCGAGTCACCCTCGGTGATAATAAGCGTACA 153062 | ||||| |||| || || | || || || || || || || | ||| | ||| || Sbjct 46671 TGAGACCAGCAACTGCGAGTGTCTTAGCGGAATCTCCTTCCGTCAGAATCAACGTGCA 46614 Score = 82.4 bits (90), Expect = 8e-11 Identities = 180/267 (67%), Gaps = 2/267 (1%) Strand=Plus/Minus Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364 ||||||||||| || | | || | |||||| |||||| ||| | | || ||||| Sbjct 47638 GTGAAAATGTATCGGGGGGAAGCTGAATCCTTTCCACCAAGAAGCCTTGATCCAAATTGA 47579 Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424 || || || | || | |||||||| || | |||| || || | || || Sbjct 47578 CCCAGTGGAAGCAGCAAATTGATGTTGTTGGATCCAATGAAGTCGTGGGCGAGATTCACG 47519 Query 117425 ATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCC 117484 |||||| | || ||||| || || |||||||| | ||||| | |||||| || Sbjct 47518 ATCGTAGCAGAAAGCGATGCCTCTCCGTGATGATACGCAGAATGCTCTGACACGTATCCA 47459 Query 117485 GCCAGCTGAGCCACCTTCATGTCTGA-CGTCAGGTTCTTCTTGAGGCAGGCATAAATCAC 117543 | || || ||||| || || || || ||| || ||| |||||| || | | | | ||| Sbjct 47458 ACAAGTTGGGCCACTTTGATCTCAGATCGT-AGATTCCTCTTGAAACACGAAAAGAGCAC 47400 Query 117544 CTTGCGCTGACTTGGCTTCAGACCATC 117570 ||| | ||| | ||||||||| ||||| Sbjct 47399 CTTTCTCTGTCCTGGCTTCAGTCCATC 47373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547212326812600