Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterospora_20canceri_20[genbank_20GCA_5F002087915.1_202017-04-12] 537 sequences; 3,095,385 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq351 167 3e-36 seq307 132 5e-26 seq347 93.3 5e-14 >seq351 Length=13504 Score = 167 bits (184), Expect = 3e-36 Identities = 181/240 (75%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 27393 AAATATTACTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGA 27452 |||| |||| ||||||| | || || ||||| || || || ||||| || || ||||| Sbjct 4630 AAATTTTACCCTAATGCAGGTGTTCGTGAAGACACTCACAGGAAAGACAATCACACTTGA 4689 Query 27453 GGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAAT 27512 |||||| || |||| | |||| ||| ||||||| || || |||||||||||||| || Sbjct 4690 GGTTGAATCGAGTGACACGATTGAGAATGTGAAGGCGAAGATACAGGACAAGGAGGGCAT 4749 Query 27513 TCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT 27572 |||||||||||||||| | || || |||||||| ||||| || || || | | | || || Sbjct 4750 TCCTCCAGACCAGCAGAGGCTGATATTTGCTGGCAAGCAGCTTGAAGACGGTAGGACACT 4809 Query 27573 AGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||| || |||| ||||| ||| || || || || ||||| ||||| ||||| Sbjct 4810 GAGTGACTACAACATCCAGAAGGAGAGCACGCTCCACCTTGTTTTGCGACTTCGTGGTGG 4869 >seq307 Length=79363 Score = 132 bits (146), Expect = 5e-26 Identities = 144/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||| | ||||| |||||||| || || ||||| || || || || || ||||| || Sbjct 61082 ATGCAAGTATTTGTGAAGACGCTGACAGGAAAGACAATCACGCTGGAAGTGGAGTCGAGT 61023 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||||| || |||||||||||||| |||||||| ||||||||| Sbjct 61022 GACACGATCGAGAACGTAAAGGCAAAGATTCAGGACAAGGAAGGAATTCCACCAGACCAG 60963 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || |||||||| ||||| || || |||| | || ||| |||||||| Sbjct 60962 CAGAGGCTCATCTTTGCTGGAAAGCAGCTTGAAGATGGCAGGACGCTAAGCGACTATAAC 60903 Query 27586 GTCCAAAAGGA 27596 | || ||||| Sbjct 60902 ATTCAGAAGGA 60892 >seq347 Length=13642 Score = 93.3 bits (102), Expect = 5e-14 Identities = 141/197 (72%), Gaps = 3/197 (2%) Strand=Plus/Minus Query 64659 TACTAAA-AAGGCTGAATGGGCCATCCGGTGGAT-GAATCGTGGGTCGTCGTTTGGTCAG 64716 ||| ||| ||||| || ||||| || ||||||| || || || || |||| | | Sbjct 5151 TACGAAAGAAGGCAGATTGGGCAATGAGGTGGATTGAGTC-TGCTGAATCATTTGATACG 5093 Query 64717 CGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATT 64776 | | | || ||||||||||| || |||||||||||| ||| ||||| | | || Sbjct 5092 AGAATGGTTGCATTTGCCTGTGTTGAGGGAATTTTCTTTAGTGGATCATTTGCTGCCATA 5033 Query 64777 TTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCT 64836 |||||| | || ||| |||| ||||||| ||| ||| || || || |||||||| Sbjct 5032 TTCTGGATGAAGAAGAGGGGATTGATGCCTGGTTTGTGCTTCTCAAATGAGCTGATTAGC 4973 Query 64837 CGGGACGAGGGGCTCCA 64853 |||||||||| ||||| Sbjct 4972 AGGGACGAGGGACTCCA 4956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570306571791440