Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterospora_20canceri_20[genbank_20GCA_5F002087915.1_202017-04-12] 537 sequences; 3,095,385 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq307 105 6e-18 seq351 87.8 2e-12 >seq307 Length=79363 Score = 105 bits (116), Expect = 6e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 ||||| || || |||||||| || || || ||||| ||| || || | | || ||| Sbjct 60874 ACCAAGTGCAGTGTGCTCTCCTTCTGAATGTTATAGTCGCTTAGCGTCCTGCCATCTTCA 60933 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| || || ||||| || || | ||||||||| | || | | || |||||| || Sbjct 60934 AGCTGCTTTCCAGCAAAGATGAGCCTCTGCTGGTCTGGTGGAATTCCTTCCTTGTCC-TG 60992 Query 39196 ATTTTCTGTTTGAGCGT-CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 | | | || | ||| | | | ||| || ||||||||||| |||| |||||| | || Sbjct 60993 AATCTTTGCCTTTACGTTCTCGATCGTGTCACTCGACTCCACTTCCAGCGTGATTGTCTT 61052 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||| |||||||| || ||||| | |||||| Sbjct 61053 TCCTGTCAGCGTCTTCACAAATACTTGCAT 61082 >seq351 Length=13504 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || ||||||||||| || || || || || || ||||| | |||| |||||||| Sbjct 4845 TGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCACTCAGTGTCCTACCGTCTTCAAGCTGC 4786 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| |||||||| || | ||||||||| | || | || ||| |||||| || ||| Sbjct 4785 TTGCCAGCAAATATCAGCCTCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGTATCTTC 4726 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || | || | | ||| || ||||| || || || | ||||| | ||||| || Sbjct 4725 GCCTTCACATTCTCAATCGTGTCACTCGATTCAACCTCAAGTGTGATTGTCTTTCCTGTG 4666 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || || | ||||| Sbjct 4665 AGTGTCTTCACGAACACCTGCAT 4643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429542788758281