Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087875.1_202017-04-12] 2,344 sequences; 4,834,792 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq1858 86.0 6e-12 >seq1858 Length=2805 Score = 86.0 bits (94), Expect = 6e-12 Identities = 276/423 (65%), Gaps = 18/423 (4%) Strand=Plus/Minus Query 16693 TTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCCATGAAATCAAAAGGATT 16752 ||| || || || |||||||| || | | || || || ||||| |||| || || || Sbjct 1573 TTTCTCAAAGAAATTAGTTTTACCTTGCAATGAAATGTTGTCCATAAAATGGAATGGGTT 1514 Query 16753 AGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAATCTATCCGCTACAAAT 16810 | || || |||| |||||| | || | ||| | ||||||||| || | |||| Sbjct 1513 TGGAGTGTTGTAAAT--TTTAGACTCACCTAATTCATAAAGTAATCTATCAGCAATAAAT 1456 Query 16811 TCTATATATTGGCACATTAATTC-GCAGTTCATTCCTATAAGACGTACCGGAAGAGCTTC 16869 || || || | | |||| || ||| ||||| || || | ||| || | ||| || Sbjct 1455 TCAATGTACTCACTCATTTGTTTAGCA-TTCATCCCAATTAATTTTACAGGTAAAGCCTC 1397 Query 16870 CGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGCAACTCGTTCCTC 16929 | |||||| || ||||| |||| ||||| | |||| || || | Sbjct 1396 AGCAAAAAATTCTTTTTCTATTTCAACTGCTTCACGGACAATA--------TCTTTAAT- 1346 Query 16930 GGACGGTG---TATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCC 16986 | |||||| | | | | | || | | || ||| || ||||| ||| || || Sbjct 1345 GTACGGTGATTTCTCTCTGAAATACTCGTGAAGCAAACAAGCAAAATCAGTATGCAAACC 1286 Query 16987 CTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTT 17046 || || || |||||||| ||||||||||| | | || | | |||| ||| || Sbjct 1285 TTCATCCCTTGAAATAAGTTCATTAGAAAATGTAAGAGCAGGAAGAATACCTCTTTTTTT 1226 Query 17047 TAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGC 17106 ||||||||||| || || || || || |||||||||||||| || || | ||||| || Sbjct 1225 CAACCAAAATATTGCAGCAAAAGATCCTGAAAAGAATATACCTTCAACACAAGCAAATGC 1166 Query 17107 GAT 17109 || Sbjct 1165 AAT 1163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517530435913920