Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087875.1_202017-04-12] 2,344 sequences; 4,834,792 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq1858 89.7 5e-13 >seq1858 Length=2805 Score = 89.7 bits (98), Expect = 5e-13 Identities = 278/423 (66%), Gaps = 18/423 (4%) Strand=Plus/Minus Query 15931 tttttCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTTCCATAAAATCAAAGGGATT 15990 ||| || ||||| |||||||| || | || || || || |||||||||| || || || Sbjct 1573 TTTCTCAAAGAAATTAGTTTTACCTTGCAATGAAATGTTGTCCATAAAATGGAATGGGTT 1514 Query 15991 AGTAGC--TGAAAATATCTTAGAGTACCCCAGTTCCGTAACTAATCTATCTGCTACAAAT 16048 | || || |||| | |||| | || | ||| || ||||||||| || | |||| Sbjct 1513 TGGAGTGTTGTAAATTT--TAGACTCACCTAATTCATAAAGTAATCTATCAGCAATAAAT 1456 Query 16049 TCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAGTCGTACCGGAAGAGCTTTT 16108 || || || | || |||| | ||| || || || | | ||| || | ||| | Sbjct 1455 TCAATGTACTCACTCATTTGTTTAGCATTCATCCCAATTAATTTTACAGGTAAAGCCTCA 1396 Query 16109 GTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATATCGGTG--GCTCG-TG-T 16164 | ||||||| || |||||| |||| ||||| | ||||| | | || || | Sbjct 1395 GCAAAAAATTCTTTTTCTATTTCAACTGCTTCACGGACAATATCTTTAATGTACGGTGAT 1336 Query 16165 TTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCC 16224 ||| | | || || || || || ||| || || || ||| | || Sbjct 1335 TTC------TCTCTGAAATACTCGTG-AAGCAA---ACAAGCAAAATCAGTATGCAAACC 1286 Query 16225 TTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTT 16284 ||| || || |||||||| || ||||| || | | || | | |||| ||| || Sbjct 1285 TTCATCCCTTGAAATAAGTTCATTAGAAAATGTAAGAGCAGGAAGAATACCTCTTTTTTT 1226 Query 16285 TAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGC 16344 ||||| ||||| |||||||| || || |||||||||||||| |||||| | ||||| || Sbjct 1225 CAACCAAAATATTGCAGCAAAAGATCCTGAAAAGAATATACCTTCAACACAAGCAAATGC 1166 Query 16345 GAT 16347 || Sbjct 1165 AAT 1163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511399415558080