Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087875.1_202017-04-12] 2,344 sequences; 4,834,792 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq1869 89.7 6e-13 >seq1869 Length=2780 Score = 89.7 bits (98), Expect = 6e-13 Identities = 153/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 42972 AACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCA 43031 || || | |||||| || || ||||| || || ||||||||| |||||| | | || Sbjct 1278 AAAACAAGATGCAAAGTACTTTCCTTCTGTATGTTGTAATCACTCAGAGTTCTTCCATCT 1337 Query 43032 TCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCC 43091 ||||| || || || || ||||| |||| ||| ||||| | || | | || ||||| Sbjct 1338 TCTAGTTGTTTTCCCGCAAATATAAGTCTCTGTTGGTCTGGAGGAATACCTTCTTTGTCT 1397 Query 43092 ATGATTTTTTGTTTGAGC-GTCGCCACCGTGTC-GCTCGATTCCACATCGACCGTGATGG 43149 ||| |||| | || | | ||| | | || || ||| ||| | | || | || || | Sbjct 1398 -TGAATTTTCGCTTTAACAGTCTCAATAGTATCTGCTGGAT-CTAATTCTAATGTAATTG 1455 Query 43150 TTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186 |||| || || || ||||||||||| || |||||||| Sbjct 1456 TTTTTCCTGTAAGTGTCTTTACAAAAATCTGCATTTT 1492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571800845744320