Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087875.1_202017-04-12] 2,344 sequences; 4,834,792 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1858 140 5e-28 seq1918 122 1e-22 >seq1858 Length=2805 Score = 140 bits (154), Expect = 5e-28 Identities = 549/851 (65%), Gaps = 28/851 (3%) Strand=Plus/Minus Query 49689 TTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATT 49748 ||| || || ||||||||||| |||| |||||| || || ||||| |||| || || || Sbjct 1573 TTTCTCAAAGAAATTAGTTTTACCTTGCAATGAAATGTTGTCCATAAAATGGAATGGGTT 1514 Query 49749 GGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCCGCGACAAATTC 49808 | | || |||||||| || |||||| ||| |||||||| || | |||||| Sbjct 1513 TGGAGTGTTGTAAATTTTAGACTCACCTAATTCATAAAGTAATCTATCAGCAATAAATTC 1454 Query 49809 TATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGT 49868 || || |||| || | |||||| || || | ||| || || | |||| ||| Sbjct 1453 AATGTACTCACTCATTTGTTTAGCATTCATCCCAATTAATTTTACAGGTAAAGCCTCAGC 1394 Query 49869 AAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATCTA----ACGGTTTCTT 49924 || |||||||| ||| || || || || | |||| | || ||||| || Sbjct 1393 AAAAAATTCTTTTTCTATTTCAACTGCTTCACGGACAATATCTTTAATGTACGGTGATTT 1334 Query 49925 CACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCT 49984 | ||| || |||| || | |||||| || ||||| |||| ||| | Sbjct 1333 CTCTC------TGAAATACTCGT----GAAGCAAACAAGCAAAATCAGTATGCAAACCTT 1284 Query 49985 CGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAA 50044 | || || ||| ||||| || ||||| || || | || | | || | ||||| | Sbjct 1283 CATCCCTTGAAATAAGTTCATTAGAAAATGTAAGAGCAGGAAGAATACCTCTTTTTTTCA 1224 Query 50045 GCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAA 50104 ||||||||| | ||||| || || |||||||| || ||||| || ||||| |||| Sbjct 1223 ACCAAAATATTGCAGCAAAAGATCCTGAAAAGAATATACCTTCAACACAAGCAAATGCAA 1164 Query 50105 CAAGTCTCTCTCCATAACTGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCT 50164 | ||| || |||| | | ||| ||||| || |||||||||| ||||| | Sbjct 1163 TCATTCTAGTATCAAAACTCTCATTTGAATGAATCCATTTAAGAGCCCAATCAGCCTTTT 1104 Query 50165 TTTTTACACAAGGCATCGT-TTCTATGGCATTAAAGAGATAGtttttttCATTACTATCT 50223 | || | | |||| || | ||| || | ||||| | | | | ||| | ||| Sbjct 1103 TCTTAATAGAAGG-ATAATGTTCAATACCGTTAAATAAAATATCCCTCTCACGATCATCC 1045 Query 50224 TTAACATAAGTATCGATCAA--AAGACTATACATTTCCGAATGAATGTTTTCAAT-GGCC 50280 || | | ||| || ||||| ||| ||| | || ||||| |||||||| | | Sbjct 1044 TTGATAAGAGTTTCTATCAACTTAGAGTAT--GTCTCATTATGAACATTTTCAATAGAAC 987 Query 50281 ATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCA 50340 || || || | || || | | | || || || | ||| || ||| ||||| Sbjct 986 AT-TGTAAACTATAAAATGACTTCACTTCTAACATGTGAATTTCATTAGTAAAACGTTCT 928 Query 50341 GCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATA 50400 |||||||| ||| || || || || |||||||| || || | ||| ||| || Sbjct 927 AATAAATTTTGATTAACAATACCATCTGAAGCTGCAAAGAAAGCTAGCACAGTTTTAATG 868 Query 50401 AAATGTTTTTCGT--TGGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTA 50458 ||| || || | | | | |||| | ||||||| |||||||| | || | Sbjct 867 AAAAACTTCTCATCCTCGTTTAAAGTT--TCAAAATCATTAGCATCTTTAGTAAAGTCAA 810 Query 50459 CTTCTTCCACTGTCCAAAATGA-TGCCTCTGCCTTTTTATACATATTCCAGATGTCATGA 50517 |||||| || |||| |||||| || ||||||||||||||| ||| || || || Sbjct 809 TTTCTTCAACAGTCC-AAATGACAGCAGATGCCTTTTTATACATCCCCCAAATCTCTGGA 751 Query 50518 TATTGGATTGG 50528 |||| ||||| Sbjct 750 AATTGAATTGG 740 >seq1918 Length=2592 Score = 122 bits (134), Expect = 1e-22 Identities = 316/473 (67%), Gaps = 39/473 (8%) Strand=Plus/Plus Query 79618 ACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTG 79677 |||||||| || |||||||| || || | | || |||| | ||||| || ||||||| Sbjct 383 ACAGATGCAAGGTTACAAACAGCAACATTAGTACCATCTGAATATTCAATAATTTCAGCA 442 Query 79678 CAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTAC----TCTTTTTGTTACA 79733 || | ||| || ||||| ||||| | ||| | ||||||| ||| || | || Sbjct 443 CACAAATTAGAACTTTTAATTGTTCCAAGATTCTTTTGATTAGATAATCTATTGG---CA 499 Query 79734 CGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTT 79793 | |||||||||||| ||| | |||||||||||||| || || | | ||| || ||| | Sbjct 500 -GTATCCTTATAAAGCATGTAAGGAGTACCAGTTTCTATTTGTGCTGTTATTATTGCTCT 558 Query 79794 CCAGACGACTCGAGCCTTTA------TTATAGACTTGTATCTCTTTTCTCTTTCGTATTG 79847 ||| | || ||| | | || ||||||| | ||||| || || || Sbjct 559 CCAAAGATTTCTAGCTCTAACAACCTTTCTAGACTT-----TGTTTTC----TCATAGTG 609 Query 79848 TGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCC---AG-GACATTCGT 79903 ||||||| || || || | || || || | |||||| || ||||| Sbjct 610 ATGATATAATGATTTAAATTCATTACCATGCACTTCATGTAATCCCTTAGCAACATT--- 666 Query 79904 CAGGA-CACATCAACGACCACTCTCCATCATCCTTT---ACTCGTTTCATAAAGAGATCA 79959 |||| || || ||| ||| | ||||||| ||| |||| || |||||| | |||| Sbjct 667 -AGGATCAAATAAAC-TCCA---TTCATCATCTTTTTCAACTCTTTCCATAAATAAATCA 721 Query 79960 GGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTT 80019 || ||||||||||||| ||| | ||||| | | ||||| | || |||||||| Sbjct 722 GGTATCCAAAGAGCTAAAAACATTTCTCTAGCACGCATATCCTCATCACCAGTATTCTTC 781 Query 80020 TTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 80072 | | ||| | || | | |||||| |||||| ||||||||||| || || Sbjct 782 CTTAAATCTAAAAATTCAAAAATATCTTTATGCCATGGTTCCAAGTAAATAGC 834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718247754724160