Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087875.1_202017-04-12] 2,344 sequences; 4,834,792 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq1869 89.7 5e-13 >seq1869 Length=2780 Score = 89.7 bits (98), Expect = 5e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 142973 AAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCT 143032 ||||| | ||| | ||| ||| || |||||||||||||| |||| || || ||| Sbjct 1278 AAAACAAGATGCAAAGTACTTTCCTTCTGTATGTTGTAATCACTCAGAGTTCTTCCATCT 1337 Query 143033 TCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCG 143092 || |||||||| || ||| | || || | || || || ||||| || ||||||||||| Sbjct 1338 TCTAGTTGTTTTCCCGCAAATATAAGTCTCTGTTGGTCTGGAGGAATACCTTCTTTGTC- 1396 Query 143093 GTAATTTTTTGTTTTAGCTGT-TCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGT 143151 | | |||| | |||| | || || | || || | || |||| ||| | || | || Sbjct 1397 TTGAATTTTCGCTTTAACAGTCTCAATAGTATCTGCTGGATCTAATTCTAATGTAATTGT 1456 Query 143152 CTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || || || | ||| ||||| || || ||||| Sbjct 1457 TTTTCCTGTAAGTGTCTTTACAAAAATCTGCAT 1489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506999544478080