Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087875.1_202017-04-12] 2,344 sequences; 4,834,792 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq1869 141 7e-29 >seq1869 Length=2780 Score = 141 bits (156), Expect = 7e-29 Identities = 176/236 (75%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 15133 TCTGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATC 15192 ||| |||||||| | ||||||||| | ||| | || || || |||||||||||||| Sbjct 1259 TCTACCACCTCTAAGTCTTAAAACAAGATGCAAAGTACTTTCCTTCTGTATGTTGTAATC 1318 Query 15193 GCTTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTT 15252 || ||| |||| | ||||||| |||||| || || |||| | | |||||||| Sbjct 1319 ACTCAGAGTTCTTCCATCTTCTAGTTGTTTTCCCGCAAATATAAGTCTCTGTTGGTCTGG 1378 Query 15253 TGGAATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATC-GCTATTT 15310 ||||| ||||||||||| |||||| ||| || ||| | || || ||||| ||| Sbjct 1379 AGGAATACCTTCTTTGTCTTGAATTTTCGCT-TTAACAGTCTCAATAGTATCTGCT-GGA 1436 Query 15311 TCTACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366 |||| ||||| ||||| ||||| ||||| || || ||||||||||| ||||| || Sbjct 1437 TCTAATTCTAATGTAATTGTTTTTCCTGTAAGTGTCTTTACAAAAATCTGCATTTT 1492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362168853445704