Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087875.1_202017-04-12] 2,344 sequences; 4,834,792 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq1869 96.9 3e-15 >seq1869 Length=2780 Score = 96.9 bits (106), Expect = 3e-15 Identities = 155/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 18827 CTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCG 18886 ||||| || | ||||| ||| ||||| || || |||||||| || ||| | | Sbjct 1275 CTTAAAACAAGATGCAAAGTACTTTCCTTCTGTATGTTGTAATCACTCAGAGTTCTTCCA 1334 Query 18887 TCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTG 18946 || || || ||||| |||||| | ||||||||||| || || || | || |||||| Sbjct 1335 TCTTCTAGTTGTTTTCCCGCAAATATAAGTCTCTGTTGGTCTGGAGGAATACCTTCTTTG 1394 Query 18947 TCGGCAATTTTCTGTTTTACCTGGC-CGACAGTATCGCCAGGCTCCGTTTCGACGGTAAT 19005 || ||||||| | |||| | | | | | |||||| | || || ||| | ||||| Sbjct 1395 TCTTGAATTTTC-GCTTTAACAGTCTCAATAGTATCTGCTGGATCTAATTCTAATGTAAT 1453 Query 19006 GGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATTTTA 19045 ||||| ||||| | || || |||||||| ||||||||| Sbjct 1454 TGTTTTTCCTGTAAGTGTCTTTACAAAAATCTGCATTTTA 1493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414560956691536